G208640


Basic Information

Item Value
gene id G208640
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 28209395 ~ 28209959 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU283194
CAGCAGATCCGGTAATTTTTCTATTTCCATAAGGAAACAAGTAATGTCATTTACAGACATAGACTTAcaagttacatatttattatatttatatttattattatattatatttacttcagtCGCTTAGAAAccttcattaaattattaatctggCTCTTTACTTTGGAAAATCTATTCAATATCCAgtacaatacactgtatttaataaaaacacacaaactgaccaACAGCACCACAGCTAGCCTAACTCACTCCAGTCTAAATGCTGGACAGCCTGGATCATTAGCTTAAAAAAGCGCTGTTTAATTTTGCGTGCGTGTATGCATTTTTCTTGACGCGGCTCCGAGACAAAGTGGATCAGATCTTTCGCGCTGCGTGGGGAGATTGATTTCGTtactaaaattctttaattgtgGTATACTTTAagatttgaacatttttaacatattagagagacacttctgtaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283194 True 469 lncRNA 0.33 2 28209395 28209959

Neighbor

gene id symbol gene type direction distance location
adat1 NA coding downstream 16330 28177140 ~ 28193065 (-)
tmem231 tmem231 coding downstream 46042 28156767 ~ 28163353 (-)
LOC103031696 ano1,LOC105911290,LOC106573096 coding downstream 975805 27026494 ~ 27233590 (-)
LOC111195771 NA coding downstream 1057095 27146036 ~ 27152300 (-)
LOC111195765 NA coding downstream 1098357 27108299 ~ 27111038 (-)
nup160 nup160,LOC107555692,LOC107756876 coding upstream 100907 28310866 ~ 28367957 (-)
rpl27a rpl27a,LOC107687759,LOC108439055 coding upstream 262562 28472521 ~ 28476854 (-)
psma1 psma1,LOC108439057,LOC107748950 coding upstream 273532 28483491 ~ 28489434 (-)
LOC103040620 LOC108443074 coding upstream 392931 28602890 ~ 28622098 (-)
LOC103041235 NA coding upstream 458771 28668730 ~ 28683502 (-)
G208551 NA non-coding downstream 74053 28135141 ~ 28135342 (-)
G208542 NA non-coding downstream 944436 27264576 ~ 27264959 (-)
G208529 NA non-coding downstream 999128 27208113 ~ 27210267 (-)
G208527 NA non-coding downstream 1001746 27206810 ~ 27207649 (-)
G208520 NA non-coding downstream 1035004 27170753 ~ 27174391 (-)
G208647 NA non-coding upstream 76573 28286532 ~ 28286897 (-)
G208649 NA non-coding upstream 80650 28290609 ~ 28292211 (-)
G208662 NA non-coding upstream 146655 28356614 ~ 28357085 (-)
G208665 NA non-coding upstream 163132 28373091 ~ 28381368 (-)
G208683 LOC108439052 non-coding upstream 208676 28418635 ~ 28421081 (-)
G208394 borcs5,LOC107753635 other downstream 1553211 26655443 ~ 26656184 (-)
G208046 NA other downstream 1996554 26212058 ~ 26212841 (-)
LOC111195835 NA other downstream 2091763 26103487 ~ 26117632 (-)
LOC111195761 NA other downstream 2120980 26086651 ~ 26088415 (-)
LOC111195762 NA other downstream 2122891 26079764 ~ 26086504 (-)
wwp2 wwp2,LOC108439047,LOC107740243,LOC107560080 other upstream 6436 28216395 ~ 28268369 (-)
LOC107197304 NA other upstream 452224 28662183 ~ 28695700 (-)
lrp5 lrp5,LOC107654131,LOC107714037,LOC107581849,LOC107701817,LOC106573620 other upstream 573124 28783083 ~ 28860774 (-)
G209090 NA other upstream 1814002 30023961 ~ 30024550 (-)
G209127 NA other upstream 1952498 30162457 ~ 30162973 (-)

Expression


Co-expression Network