G208665


Basic Information

Item Value
gene id G208665
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 28373091 ~ 28381368 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU283222
agcattatttttaatgacATGTTGAAATTTAAACCAGTTCATAGATTATCATATAAAACAATTaggctaaaaaaaacagtttaacagttttacAAATCAGATCCGCTAAAACACAGACAGTGGTCCAAATTCCTTTTTGCAGCATGAAGGttcaaattctctctctctctcacacacacacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283222 True 205 lncRNA 0.34 2 28373091 28381368

Neighbor

gene id symbol gene type direction distance location
nup160 nup160,LOC107555692,LOC107756876 coding downstream 5134 28310866 ~ 28367957 (-)
adat1 NA coding downstream 180026 28177140 ~ 28193065 (-)
tmem231 tmem231 coding downstream 209738 28156767 ~ 28163353 (-)
LOC103031696 ano1,LOC105911290,LOC106573096 coding downstream 1139501 27026494 ~ 27233590 (-)
rpl27a rpl27a,LOC107687759,LOC108439055 coding upstream 91153 28472521 ~ 28476854 (-)
psma1 psma1,LOC108439057,LOC107748950 coding upstream 102123 28483491 ~ 28489434 (-)
LOC103040620 LOC108443074 coding upstream 221522 28602890 ~ 28622098 (-)
LOC103041235 NA coding upstream 287362 28668730 ~ 28683502 (-)
gal galn,gal,LOC108443068,LOC108268663 coding upstream 312798 28694166 ~ 28701575 (-)
G208662 NA non-coding downstream 16006 28356614 ~ 28357085 (-)
G208649 NA non-coding downstream 80880 28290609 ~ 28292211 (-)
G208647 NA non-coding downstream 86194 28286532 ~ 28286897 (-)
G208640 NA non-coding downstream 163132 28209395 ~ 28209959 (-)
G208551 NA non-coding downstream 237749 28135141 ~ 28135342 (-)
G208683 LOC108439052 non-coding upstream 37267 28418635 ~ 28421081 (-)
G208702 flnc,LOC108439053,LOC108439063 non-coding upstream 80160 28461528 ~ 28463518 (-)
LOC111195846 NA non-coding upstream 109983 28491351 ~ 28492233 (-)
LOC111195852 NA non-coding upstream 115083 28496451 ~ 28497291 (-)
LOC111195780 NA non-coding upstream 116523 28497891 ~ 28498363 (-)
wwp2 wwp2,LOC108439047,LOC107740243,LOC107560080 other downstream 104722 28216395 ~ 28268369 (-)
G208394 borcs5,LOC107753635 other downstream 1716907 26655443 ~ 26656184 (-)
G208046 NA other downstream 2160250 26212058 ~ 26212841 (-)
LOC111195835 NA other downstream 2255459 26103487 ~ 26117632 (-)
LOC111195761 NA other downstream 2284676 26086651 ~ 26088415 (-)
LOC107197304 NA other upstream 280815 28662183 ~ 28695700 (-)
lrp5 lrp5,LOC107654131,LOC107714037,LOC107581849,LOC107701817,LOC106573620 other upstream 401715 28783083 ~ 28860774 (-)
G209090 NA other upstream 1642593 30023961 ~ 30024550 (-)
G209127 NA other upstream 1781089 30162457 ~ 30162973 (-)
LOC103038932 ldb2a,LOC108424199,LOC107756465,LOC107694979,LOC107680613,LOC107550874,LOC107741120 other upstream 1820163 30201531 ~ 30318216 (-)

Expression


Co-expression Network