cd79a


Basic Information

Item Value
gene id cd79a
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 7693133 ~ 7701787 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007232439.2
TAAGCTAAAATATTACCATATtaaggagaagaaaagagaaatgacAGAAGTTGAGTGGTGgggaagggaaaaaaacaaatgagtGGGAGTGAACAGAAAAAGACTTGTTATACAGCGAGGAAGTGACATTTAAGTCACTGTTTTACTGGACTCTGTGTTTGAAGTACAGAAGATGAAGATGGAAGCAAGCATTATGGTTCTGCTGTGTCTCCTGGCAGCTGCTGCCCATGCTAAACCTCCCACCGTGACCCTGCATAGTGACCTGATCTCCCTGCGCATCGCTGTCTCACAGACTGCCTCTCTCCAGTGCTGTTACAGCAGCGAAGCAGACTTGAACGTCAACTGGACCTTGACCGTTATGATCACCCACAACGACAGCGTGGTCATGAATGTCAACCAGACAGATAAACGAATGCATGTCGTCCCAGAAAGTGAGAATAATCAGGGCGTTAAATGCAGTTCTCTGCAGATTCAAAATGTCAGTGTTAAAGACAGAGGCCTGTACAGGTGCGCCCTGCACCATACAAGCTCGAGCTTCTCAGTCCACACGCCCGGCACATTCCTGCAGGTGTTTGAGCCCATGGAGAAGGTCCTGGACATCAGTGAGAGCTGGAAGAACAGTATCATCACGGCTGAAGGGGTTCTCCTCTTGTTGTGTGTGCTCATTCCTGGCACCATGCTCATCTTCAAGtcaAAGGGACTGCACGAGCTGGAGAGAAGAAAGGGCAAGGAGGAAGAAAACATTTAtgagGGTCTGAATCTGGATGATTGCAACTCTACCTATCATCAGATCCAGCGCTCTCAAGTCCAGGGACCTTACCATGATGTCAGCAACGCTGTGGAAGAAGACATTGAATTTGAGAAGCCCTGAATGTGTGACAGTGGGGAGGCTGATAAAGTAATAAGAGCAGTTTAGATGTCTAGGGAATaccatattttaataaaagagtTTAAGAGGAAAGATACAGAAGGTTTTTCATATCTGTGTTAATAGACTGTTTTTGTGCGTTTTcacatttacagctctgaaaaaaaataagataccacttaaaaattatgagtttctttcattttaccaaattaaaaaacctttggaatataatcaagaggaagatggaggatcacaagccatcaaatcaagatgaactg

Function

GO: NA

KEGG:

id description
K06506 CD79A, IGA; CD79A antigen

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007232439.2 True 1149 mRNA 0.44 5 7693133 7701787

Neighbor

gene id symbol gene type direction distance location
arhgef1 arhgef1 coding upstream 3050 7615911 ~ 7690083 (+)
LOC103032681 LOC103032681,LOC108431014,LOC107699460,LOC107596612,LOC107706551,LOC107723390,LOC108256284,LOC107657604 coding upstream 97171 7529077 ~ 7595962 (+)
megf8 megf8,LOC107595817,LOC107687796 coding upstream 274201 7382150 ~ 7418932 (+)
LOC103023753 NA coding upstream 359459 7327338 ~ 7333674 (+)
LOC103022811 LOC108431076,LOC108256683 coding upstream 369390 7311302 ~ 7323743 (+)
lipe lipe,LOC107699484,LOC107595727 coding downstream 2841 7704628 ~ 7745239 (+)
tmem145 tmem145,LOC107706472,LOC107723540,LOC107595744,LOC107657707,LOC107593664 coding downstream 48026 7749813 ~ 7827654 (+)
LOC111194782 LOC108257934,LOC108257933,LOC108431011,LOC101066992,LOC107739933 coding downstream 139974 7841761 ~ 7843293 (+)
LOC107196909 LOC108431011,LOC108257934,LOC108257933,LOC107739933 coding downstream 146287 7848074 ~ 7849854 (+)
LOC103029195 LOC108257934,LOC105939654,LOC108257933,LOC101066992 coding downstream 152583 7854370 ~ 7857217 (+)
G17204 NA non-coding upstream 732 7632912 ~ 7692401 (+)
G17180 NA non-coding upstream 256518 7435901 ~ 7436615 (+)
G17070 NA non-coding upstream 337947 7351618 ~ 7355186 (+)
G17062 NA non-coding upstream 353151 7337431 ~ 7339982 (+)
G16969 NA non-coding upstream 643835 6948070 ~ 7049298 (+)
G17221 LOC108431065,LOC108261516,LOC108257915 non-coding downstream 158097 7859884 ~ 7872227 (+)
G17285 NA non-coding downstream 299236 8001023 ~ 8008808 (+)
G17300 anks6 non-coding downstream 333985 8035772 ~ 8036474 (+)
G17329 NA non-coding downstream 483608 8185395 ~ 8186009 (+)
LOC111194819 NA non-coding downstream 925591 8627378 ~ 8630083 (+)
LOC103032995 NA other upstream 263742 7422571 ~ 7429391 (+)
G16820 NA other upstream 1160265 6532396 ~ 6532868 (+)
LOC103025913 NA other upstream 1515249 6168760 ~ 6177884 (+)
LOC103038305 NA other upstream 3175824 4515997 ~ 4517309 (+)
nrgn NA other upstream 5521926 2150630 ~ 2171207 (+)
LOC103041197 NA other downstream 467052 8168839 ~ 8184837 (+)
G17414 NA other downstream 973832 8675619 ~ 8716787 (+)
LOC111191971 NA other downstream 1189457 8891244 ~ 8899645 (+)
LOC111191978 NA other downstream 1198153 8899940 ~ 8904004 (+)
G17443 NA other downstream 1214799 8916586 ~ 8950159 (+)

Expression


Co-expression Network