LOC103023753


Basic Information

Item Value
gene id LOC103023753
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 7327338 ~ 7333674 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007236521.3
GTCAGTTAGAGGAGCAGAAGGATGGAAGCTCATCCACAGTGCAGAGTGTGAAGCAGCTCAGTAATCAGACTGATGTAATGGAGCTCTGCTGTGCTCTGCAGCCTGACTCTACCTGGGATGGACCAAACTGAGCCTGGATTTACCTTTACCTGGACTGGACTGAGTGAGGAAACAGAGAATTATTATTACAAGTCATATATTCTCTAAAGGCAGAATGTCTGAGATGGATGAGTCTACGGTAAAAGGCGTGTCAGACCTAGAGTTGGTCACTTCAGTCCCTCAGAAGAATCCAGGGCCTATGATTGGTGGGCTGCGTCTGCGTTCGGCTCCTGGAGCTTGCGTGCTTTTCGCTGGTGTGCTGTTGCTTGTAGGAATAGGTGTGGCTGTGGGCGGCTACTGGCCTCATCGTACCCGGAGACCACCGTCACACCACACCCCGACTGGCCGAACAGCTGCTGAGAAACTCAGACTGGTTGGTCCCATCATCATGGGAGTGGGCTTGTTCATCTTCATCTGTGCCAACACACTCCTGTATGAGAACAGAGACCGGGACTGGGATCGGGACCGGAACCAGGACCAGAACCAGGACCAGAACCAAAGGCTGAATGCAGAAAACCAAGACATTCCTTTATCTATTGAGTGGGAAAGGCCTCTAGACACCAACTCAACGACATACCCAGAGATAGAACCAACTATCAGCAGGGACGCACTGACGCTGTCAGAGCTCAACATCCACTGCTTGCAGGAACAGATGGCCATTCCTACTCTAAAGTGCTCTTCCCCCTCCGACTCGTCCAACTCCAGCCAGGATAACTTTGACCTGGACAGGGCGTCTCCTCCCCCAGATAGCAGAGCCATAGTTACACTGACCCTTCCGGTCATCAAGCTCAACAACTGCCTTATAAGCTGCCCAGAAGCTCCACCCCTTCCAGAGAGAACTTACCGCACAAGTGTTACAGTGGCCACAGTGACAAAAGTGGGACTGGCACAAATAGAGCATTCCACTTCCGCTCTAATGAAGGAATTTAGTTACAGAGAGGTTGAGGATCGGTAGGCACCAAAAAAAGGAATGGTGAAATATCTGACCATGCCTGaaagttctcctccaccttcttTTAAACTTTCTGTTTCCTGTTATAAAGCTTTCACATTTCACCACAATTTCCTGCCTATTCTTTGTGGCTTCACATCTTCTGCTTAGTACCTTCAGAAGGAGGCTGCTGGCCTTCAGAACTTTCATTTAACTGAGATGAGAACATCATGGCCTGATCAGAAACATGCAAAAAGATGGAATGACCAGTAATTACCAGTAATGCTAACATTGccttctgtgtgagtgtgtctgtatATTACATGCAATGAATATAGAACACAATGTAGACACCTACATTGTCTATGAACATCTTTGCAGCAAAATACAGTAGGTGTAATATTTCCAGTGCCAAAAGAAATATCATATTTCATAAGGCCTAAGCTGGTATTTGATCAAGGTCAAGGTCATTGAAAAGCTGGTTACCCAGGCAAAAACATAGTCTATACTAACCAGCTCCTGAGAGCATAATGTATGTTTCATTTGATTCTGGGCTTCTTGGTCACGCTGGTCGACCACCTTGGTCTTGCATGCCCTGTGCTAATCAAGCTGTTAAACTagcaatatatgttttttcagAAGAGTTAAAACATTTACAACAATAATCGTAAAATTGCATTTTCATGGGACAAACCAAAAACTATGTTCTAAACTTCCTATGTAGGCTaatgttaaagacatttaaTTCCATAACGAGAGTCTAAAGCCCTatttggatgggattagtttctcagggggatgtctgtgaaaaatatttcacacttctactcagtgataaaactcttgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007236521.3 True 1878 mRNA 0.45 2 7327338 7333674

Neighbor

gene id symbol gene type direction distance location
LOC103022811 LOC108431076,LOC108256683 coding upstream 3595 7311302 ~ 7323743 (+)
LOC103022302 LOC108431077 coding upstream 20253 7299671 ~ 7307085 (+)
esrp1 esrp1,LOC107593677,LOC107706288,LOC107657715 coding upstream 154581 7142368 ~ 7172757 (+)
LOC103046513 rnf41l,LOC108443277,LOC107593678,LOC107723454,LOC107687809 coding upstream 215393 7101581 ~ 7111945 (+)
pdp1 pdp1,LOC107706250,LOC107687812,LOC107595893,LOC107593682 coding upstream 326146 6991903 ~ 7001192 (+)
megf8 megf8,LOC107595817,LOC107687796 coding downstream 48476 7382150 ~ 7418932 (+)
LOC103032681 LOC103032681,LOC108431014,LOC107699460,LOC107596612,LOC107706551,LOC107723390,LOC108256284,LOC107657604 coding downstream 195403 7529077 ~ 7595962 (+)
arhgef1 arhgef1 coding downstream 282237 7615911 ~ 7690083 (+)
cd79a NA coding downstream 359459 7693133 ~ 7701787 (+)
lipe lipe,LOC107699484,LOC107595727 coding downstream 370954 7704628 ~ 7745239 (+)
G16969 NA non-coding upstream 278040 6948070 ~ 7049298 (+)
G16968 NA non-coding upstream 400319 6926771 ~ 6927019 (+)
G16845 NA non-coding upstream 425427 6901222 ~ 6901911 (+)
G16839 galnt1,LOC107593713,LOC107657719 non-coding upstream 527202 6689720 ~ 6800136 (+)
G16838 galnt1,LOC107723435,LOC107657719 non-coding upstream 643231 6674715 ~ 6684107 (+)
G17062 NA non-coding downstream 3757 7337431 ~ 7339982 (+)
G17070 NA non-coding downstream 17944 7351618 ~ 7355186 (+)
G17180 NA non-coding downstream 102227 7435901 ~ 7436615 (+)
G17204 NA non-coding downstream 299238 7632912 ~ 7692401 (+)
G17206 NA non-coding downstream 360644 7694318 ~ 7704025 (+)
G16820 NA other upstream 794470 6532396 ~ 6532868 (+)
LOC103025913 NA other upstream 1149454 6168760 ~ 6177884 (+)
LOC103038305 NA other upstream 2810029 4515997 ~ 4517309 (+)
nrgn NA other upstream 5156131 2150630 ~ 2171207 (+)
G15839 NA other upstream 5645316 1681159 ~ 1682022 (+)
LOC103032995 NA other downstream 88897 7422571 ~ 7429391 (+)
LOC103041197 NA other downstream 835165 8168839 ~ 8184837 (+)
G17414 NA other downstream 1341945 8675619 ~ 8716787 (+)
LOC111191971 NA other downstream 1557570 8891244 ~ 8899645 (+)
LOC111191978 NA other downstream 1566266 8899940 ~ 8904004 (+)

Expression


Co-expression Network