trnat-ugu_10


Basic Information

Item Value
gene id trnat-ugu_10
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 6923599 ~ 6923671 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnat-ugu_10
GGCTCCATAGCTCAGAGGTTAGAGCACTGGTCTTGTAAACCAGGGGTCGCGAGTTCAATTCTCGCTGGGGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnat-ugu_10 True 73 tRNA 0.56 1 6923599 6923671

Neighbor

gene id symbol gene type direction distance location
trnat-ugu_9 NA coding downstream 106 6923421 ~ 6923493 (-)
trnat-ugu_8 NA coding downstream 284 6923243 ~ 6923315 (-)
trnat-ugu_7 NA coding downstream 460 6923067 ~ 6923139 (-)
galnt1 galnt1,LOC107657719,LOC107723435 coding downstream 26779 6675076 ~ 6896820 (-)
nr4a3 nr4a3,LOC107596005,LOC107657725,LOC107687818,LOC107593690 coding downstream 512178 6368118 ~ 6411421 (-)
trnat-ugu_11 NA coding upstream 1457 6925128 ~ 6925200 (-)
trnat-ugu_12 NA coding upstream 1993 6925664 ~ 6925736 (-)
trnat-ugu_13 NA coding upstream 2172 6925843 ~ 6925915 (-)
trnat-ugu_14 NA coding upstream 2351 6926022 ~ 6926094 (-)
trnat-ugu_15 NA coding upstream 2528 6926199 ~ 6926271 (-)
G16965 NA non-coding downstream 4942 6918196 ~ 6918657 (-)
G16962 NA non-coding downstream 24119 6899211 ~ 6899480 (-)
G16951 NA non-coding downstream 140368 6775573 ~ 6783231 (-)
G16939 NA non-coding downstream 250843 6670069 ~ 6672756 (-)
G16921 NA non-coding downstream 277605 6643203 ~ 6645994 (-)
G17086 pdp1,LOC107593682,LOC107706250,LOC107687812 non-coding upstream 72727 6996398 ~ 7001156 (-)
G17093 NA non-coding upstream 88332 7012003 ~ 7015844 (-)
G17117 esrp1,LOC107706288 non-coding upstream 224906 7148577 ~ 7155902 (-)
G17121 NA non-coding upstream 262522 7186193 ~ 7186801 (-)
G17122 NA non-coding upstream 263194 7186865 ~ 7187855 (-)
sec61b sec61b,LOC102796100 other downstream 379324 6534859 ~ 6544275 (-)
LOC111191940 NA other downstream 560594 6354945 ~ 6363005 (-)
LOC103024654 NA other downstream 813316 6105816 ~ 6110283 (-)
glipr2 glipr2,glipr2l,LOC107706057,LOC107689891 other downstream 823255 6083120 ~ 6100344 (-)
G16709 NA other downstream 1223112 5697045 ~ 5700487 (-)
LOC103026934 ahrr,LOC108431062 other upstream 1001258 7924929 ~ 8007620 (-)
LOC111188216 NA other upstream 1937463 8861134 ~ 8886317 (-)
G17638 NA other upstream 2638756 9562427 ~ 9562725 (-)
mak mak other upstream 3071474 9995145 ~ 10009151 (-)
G17792 NA other upstream 3323004 10246675 ~ 10247318 (-)

Expression


Co-expression Network