G61856


Basic Information

Item Value
gene id G61856
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 4149551 ~ 4149817 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU83467
aatacatcaaacctgttctcccatctccgagaacaccaccccgctgtgcagcgcaaagtatgtgttcagtttataattttaatctgaacctaaataaaacctctttgtagtcgtgcataacccatgcggtaagcgcccgcaaaagcgctgagttatccgaaattcgggcacgcaggtacaggcgtgaagtgcgtgctacgatggattcacgtgtccgtgtaaaggtacTGGCCGGACTGGACGTGAAAGACGCCATtaatttacatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83467 True 267 lncRNA 0.48 1 4149551 4149817

Neighbor

gene id symbol gene type direction distance location
LOC111192866 NA coding downstream 22243 4124790 ~ 4127308 (-)
phyh phyh,LOC107743808 coding downstream 27795 4116738 ~ 4121756 (-)
LOC103027117 LOC103027117,LOC108438787 coding downstream 35183 4100965 ~ 4114368 (-)
wnt7b wnt7b,wnt7ba,LOC103028473,LOC107695867,LOC107725526,LOC107732964 coding downstream 159069 3968846 ~ 3990482 (-)
LOC103029416 LOC108438794 coding downstream 218948 3919017 ~ 3930603 (-)
LOC103040249 tnnt2e,LOC108425385,LOC108279691,LOC107658902 coding upstream 168623 4318440 ~ 4334012 (-)
LOC107197701 zgc:101560,LOC108425328,LOC108279438,LOC107656258,LOC107725970,LOC107581287,LOC107658770,LOC107584059 coding upstream 298059 4447876 ~ 4461525 (-)
LOC103023194 dock4b,LOC108425388,LOC108279862,LOC107656358 coding upstream 851133 5000950 ~ 5199612 (-)
LOC103042505 LOC103042505,LOC108425390,LOC108280006 coding upstream 1164740 5314557 ~ 5336399 (-)
LOC103037729 LOC108442307,LOC107676911,LOC107583751 coding upstream 1306892 5456709 ~ 5494651 (-)
G61851 NA non-coding downstream 18587 4130339 ~ 4130964 (-)
G61837 NA non-coding downstream 50170 4083724 ~ 4099381 (-)
G61833 ppara non-coding downstream 73579 4073769 ~ 4075972 (-)
G61818 NA non-coding downstream 136211 4010788 ~ 4013340 (-)
G61785 NA non-coding downstream 139608 4009437 ~ 4009943 (-)
LOC111192867 NA non-coding upstream 162232 4312049 ~ 4313739 (-)
G61907 NA non-coding upstream 373342 4523159 ~ 4523371 (-)
G61930 NA non-coding upstream 446749 4596566 ~ 4596986 (-)
G61940 NA non-coding upstream 470905 4620722 ~ 4621086 (-)
G61941 NA non-coding upstream 471794 4621611 ~ 4621826 (-)
cdpf1 cdpf1,LOC107695897 other downstream 303082 3840601 ~ 3846469 (-)
G61676 NA other downstream 491283 3650845 ~ 3658268 (-)
mdm1 NA other downstream 600849 3529520 ~ 3548702 (-)
G61587 NA other downstream 834312 3314153 ~ 3315239 (-)
LOC103031776 NA other downstream 1615198 2464834 ~ 2534353 (-)
LOC103039416 cald1a,LOC108425386,LOC107656362,LOC107725991,LOC107658884,LOC107710121 other upstream 185301 4335118 ~ 4426156 (-)
G61942 NA other upstream 472396 4622213 ~ 4622577 (-)
G62377 NA other upstream 2224652 6374469 ~ 6374980 (-)
pphln1 pphln1,LOC108279830 other upstream 2483193 6633010 ~ 6695389 (-)
G62484 NA other upstream 2521793 6671610 ~ 6737948 (-)

Expression


Co-expression Network