G61940


Basic Information

Item Value
gene id G61940
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 4620722 ~ 4621086 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU83571
ctcctcaactgcagagactgaactgatggtttttctgtacatgcacacacactcttaccccacttaccccagaaaatggaaagcactaaaaaccctactacctcactggactctattgcacactgtgtaatagaggtaattactacctcactggtctttttttgcacactgcataatttgcacactgtcttgttatttattattctttgtctgtattgtgttgtattgtctgtctgcacttttgtactgttgcacttattgttttgtctacactgtgtttatgtgcaccatggtccctggaggaacgttgtttcgtttcactgtgtactctgtatatagctgaaatgacaataaaaaccactttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83571 True 365 lncRNA 0.39 1 4620722 4621086

Neighbor

gene id symbol gene type direction distance location
LOC107197701 zgc:101560,LOC108425328,LOC108279438,LOC107656258,LOC107725970,LOC107581287,LOC107658770,LOC107584059 coding downstream 159197 4447876 ~ 4461525 (-)
LOC103040249 tnnt2e,LOC108425385,LOC108279691,LOC107658902 coding downstream 286710 4318440 ~ 4334012 (-)
LOC111192866 NA coding downstream 493414 4124790 ~ 4127308 (-)
phyh phyh,LOC107743808 coding downstream 498966 4116738 ~ 4121756 (-)
LOC103027117 LOC103027117,LOC108438787 coding downstream 506354 4100965 ~ 4114368 (-)
LOC103023194 dock4b,LOC108425388,LOC108279862,LOC107656358 coding upstream 379864 5000950 ~ 5199612 (-)
LOC103042505 LOC103042505,LOC108425390,LOC108280006 coding upstream 693471 5314557 ~ 5336399 (-)
LOC103037729 LOC108442307,LOC107676911,LOC107583751 coding upstream 835623 5456709 ~ 5494651 (-)
cmas NA coding upstream 1023423 5644509 ~ 5653023 (-)
kcnj8 kcnj8,LOC108279966,LOC107725582,LOC107655555,LOC107587158,LOC107729834 coding upstream 1037362 5658448 ~ 5663281 (-)
G61930 NA non-coding downstream 23736 4596566 ~ 4596986 (-)
G61907 NA non-coding downstream 97351 4523159 ~ 4523371 (-)
LOC111192867 NA non-coding downstream 306983 4312049 ~ 4313739 (-)
G61856 NA non-coding downstream 470905 4149551 ~ 4149817 (-)
G61851 NA non-coding downstream 489758 4130339 ~ 4130964 (-)
G61941 NA non-coding upstream 525 4621611 ~ 4621826 (-)
G61943 NA non-coding upstream 2801 4623887 ~ 4624210 (-)
G61945 NA non-coding upstream 4411 4625497 ~ 4626107 (-)
G61955 NA non-coding upstream 14067 4635153 ~ 4635421 (-)
G61997 NA non-coding upstream 148877 4769963 ~ 4770173 (-)
LOC103039416 cald1a,LOC108425386,LOC107656362,LOC107725991,LOC107658884,LOC107710121 other downstream 194566 4335118 ~ 4426156 (-)
cdpf1 cdpf1,LOC107695897 other downstream 774253 3840601 ~ 3846469 (-)
G61676 NA other downstream 962454 3650845 ~ 3658268 (-)
mdm1 NA other downstream 1072020 3529520 ~ 3548702 (-)
G61587 NA other downstream 1305483 3314153 ~ 3315239 (-)
G61942 NA other upstream 1127 4622213 ~ 4622577 (-)
G62377 NA other upstream 1753383 6374469 ~ 6374980 (-)
pphln1 pphln1,LOC108279830 other upstream 2011924 6633010 ~ 6695389 (-)
G62484 NA other upstream 2050524 6671610 ~ 6737948 (-)
LOC111192938 NA other upstream 2106788 6727874 ~ 6733125 (-)

Expression


Co-expression Network