G62063


Basic Information

Item Value
gene id G62063
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 5193560 ~ 5194781 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU83701
TTTTTGAGCCAAATGTTCCCATCCACTTTCTAGGGCTCCCTTATCACTTGCATTAGTGATTGTGGGGTTAGGGcaagcacacacctcctccgatacatgtgaaCCTAACCTAACACAAAGGCTATGCAGTTGGGTTTTTGATATCCTacattacaaatctgatcacagTGCAAATAACAGGACAGATGGATATCTTAGCAGATCCAGTTTGCATACAGTTTGAACCAATAATGCTTATTTACGCACTCTGTAATAATTATTTTGCACACTATAAGGAagaccggattataaggcgcactgtaagtaaacatctattttctggtctattttcatacacaaggcacaccggattataaagcacattttaagcaGAAATTCTCAGAAACAGGGATGTGGGGGGCGAGActagtaaagctaagctaagttaagtaaacaaaaatgtagaaagaaaaaaaaaagtcagataaTTCGACCCAGCACTGGatataaatctacacagatttctctcctgaaagctgtttaattgggtgagtaaagagcttccatttatttacagtaagcttagatttccagattttcactaaggctggatcATTaccattagcggctaactgctaatgCCGCCTAACTCCcacctgacagagctacactaaggaaccctgagtgttgcAGTAAACCagagcgatattagctagcagttggtcctacatagcttgttttaacatggtaaatagACCATATGTAACAGATAGTACTCACCTTTGAATGTACAAATACCTATCACAGTtagctggtaatgctaatgctgctggacagctaaactgaatctcctgtataacgctgcacttcagcagagtggctttgctgcaccttacaacctgacagatagaattcatacatacatacaattcATAGATAcatattttaagtgcgccttatagtgcgaaaaattaGCAATGACCATATCTGTGACACTCAAAAATAAGATGTTTTTCTGTATCTTTGTATTGGCAACTTTACATAAAACTTGATAACTTTCTGTGAAAGTCAGTCTAAAGAGTTTGTTTTGCATCATATCATAAAGtgaaaaatggcagaaatagGGACCTGGACCAGAGTCCACCTATTAAGTACCCCTGGCACGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83701 True 1145 lncRNA 0.39 2 5193560 5194781

Neighbor

gene id symbol gene type direction distance location
LOC107197701 zgc:101560,LOC108425328,LOC108279438,LOC107656258,LOC107725970,LOC107581287,LOC107658770,LOC107584059 coding downstream 732035 4447876 ~ 4461525 (-)
LOC103040249 tnnt2e,LOC108425385,LOC108279691,LOC107658902 coding downstream 859548 4318440 ~ 4334012 (-)
LOC111192866 NA coding downstream 1066252 4124790 ~ 4127308 (-)
phyh phyh,LOC107743808 coding downstream 1071804 4116738 ~ 4121756 (-)
LOC103027117 LOC103027117,LOC108438787 coding downstream 1079192 4100965 ~ 4114368 (-)
LOC103042505 LOC103042505,LOC108425390,LOC108280006 coding upstream 119776 5314557 ~ 5336399 (-)
LOC103037729 LOC108442307,LOC107676911,LOC107583751 coding upstream 261928 5456709 ~ 5494651 (-)
cmas NA coding upstream 449728 5644509 ~ 5653023 (-)
kcnj8 kcnj8,LOC108279966,LOC107725582,LOC107655555,LOC107587158,LOC107729834 coding upstream 463667 5658448 ~ 5663281 (-)
abcc9 abcc9,LOC108439416 coding upstream 470120 5664901 ~ 5726283 (-)
G62056 NA non-coding downstream 121823 5064638 ~ 5071737 (-)
G62054 NA non-coding downstream 149749 5042509 ~ 5043811 (-)
G62000 NA non-coding downstream 397550 4795715 ~ 4796010 (-)
G61997 NA non-coding downstream 423387 4769963 ~ 4770173 (-)
G61955 NA non-coding downstream 558139 4635153 ~ 4635421 (-)
G62083 NA non-coding upstream 98074 5292855 ~ 5293062 (-)
G62084 NA non-coding upstream 157147 5351928 ~ 5352169 (-)
G62087 NA non-coding upstream 165764 5360545 ~ 5360794 (-)
G62089 NA non-coding upstream 204173 5398954 ~ 5399189 (-)
G62121 NA non-coding upstream 237309 5432090 ~ 5432388 (-)
G61942 NA other downstream 570983 4622213 ~ 4622577 (-)
LOC103039416 cald1a,LOC108425386,LOC107656362,LOC107725991,LOC107658884,LOC107710121 other downstream 767404 4335118 ~ 4426156 (-)
cdpf1 cdpf1,LOC107695897 other downstream 1347091 3840601 ~ 3846469 (-)
G61676 NA other downstream 1535292 3650845 ~ 3658268 (-)
mdm1 NA other downstream 1644858 3529520 ~ 3548702 (-)
G62377 NA other upstream 1179688 6374469 ~ 6374980 (-)
pphln1 pphln1,LOC108279830 other upstream 1438229 6633010 ~ 6695389 (-)
G62484 NA other upstream 1476829 6671610 ~ 6737948 (-)
LOC111192938 NA other upstream 1533093 6727874 ~ 6733125 (-)
LOC111192940 NA other upstream 1592561 6787342 ~ 6859670 (-)

Expression


Co-expression Network