G62087


Basic Information

Item Value
gene id G62087
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 5360545 ~ 5360794 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU83730
TCAGTTAAGgggaactttcactttcagttttcgttatttcgttcgttttcgttaacagtAATACGTTgttatatggtgattatcaggccgtagctttatataaaataaaaatagtattaaaaaacagatgactatttcctggagcctggactgacccgagattttccattactttcctcgggccgggtctcGTCCGGgctgagaaataaaaatcaaagtatcctgctatttaaaagaatggaaaatttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83730 True 250 lncRNA 0.36 1 5360545 5360794

Neighbor

gene id symbol gene type direction distance location
LOC103042505 LOC103042505,LOC108425390,LOC108280006 coding downstream 24146 5314557 ~ 5336399 (-)
LOC103023194 dock4b,LOC108425388,LOC108279862,LOC107656358 coding downstream 160933 5000950 ~ 5199612 (-)
LOC107197701 zgc:101560,LOC108425328,LOC108279438,LOC107656258,LOC107725970,LOC107581287,LOC107658770,LOC107584059 coding downstream 899020 4447876 ~ 4461525 (-)
LOC103040249 tnnt2e,LOC108425385,LOC108279691,LOC107658902 coding downstream 1026533 4318440 ~ 4334012 (-)
LOC111192866 NA coding downstream 1233237 4124790 ~ 4127308 (-)
LOC103037729 LOC108442307,LOC107676911,LOC107583751 coding upstream 95915 5456709 ~ 5494651 (-)
cmas NA coding upstream 283715 5644509 ~ 5653023 (-)
kcnj8 kcnj8,LOC108279966,LOC107725582,LOC107655555,LOC107587158,LOC107729834 coding upstream 297654 5658448 ~ 5663281 (-)
abcc9 abcc9,LOC108439416 coding upstream 304107 5664901 ~ 5726283 (-)
nuak1 nuak1,nuak1a,LOC108439414,LOC107587153,LOC107729860,LOC107690659,LOC107582835 coding upstream 735546 6096340 ~ 6119766 (-)
G62084 NA non-coding downstream 8376 5351928 ~ 5352169 (-)
G62083 NA non-coding downstream 67483 5292855 ~ 5293062 (-)
G62063 NA non-coding downstream 165764 5193560 ~ 5194781 (-)
G62056 NA non-coding downstream 288808 5064638 ~ 5071737 (-)
G62054 NA non-coding downstream 316734 5042509 ~ 5043811 (-)
G62089 NA non-coding upstream 38160 5398954 ~ 5399189 (-)
G62121 NA non-coding upstream 71296 5432090 ~ 5432388 (-)
G62125 NA non-coding upstream 82788 5443582 ~ 5450277 (-)
G62127 NA non-coding upstream 84769 5445563 ~ 5452257 (-)
G62147 NA non-coding upstream 164999 5525793 ~ 5526860 (-)
G61942 NA other downstream 737968 4622213 ~ 4622577 (-)
LOC103039416 cald1a,LOC108425386,LOC107656362,LOC107725991,LOC107658884,LOC107710121 other downstream 934389 4335118 ~ 4426156 (-)
cdpf1 cdpf1,LOC107695897 other downstream 1514076 3840601 ~ 3846469 (-)
G61676 NA other downstream 1702277 3650845 ~ 3658268 (-)
mdm1 NA other downstream 1811843 3529520 ~ 3548702 (-)
G62377 NA other upstream 1013675 6374469 ~ 6374980 (-)
pphln1 pphln1,LOC108279830 other upstream 1272216 6633010 ~ 6695389 (-)
G62484 NA other upstream 1310816 6671610 ~ 6737948 (-)
LOC111192938 NA other upstream 1367080 6727874 ~ 6733125 (-)
LOC111192940 NA other upstream 1426548 6787342 ~ 6859670 (-)

Expression


Co-expression Network