LOC103036181 (LOC108438810,LOC108279896)


Basic Information

Item Value
gene id LOC103036181
gene name LOC108438810,LOC108279896
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 3868738 ~ 3889640 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671243.1
AAAGTTTTACCCAATATGACCCaaacaatgtaatgtaatatgtaatgttgcatgtaatattactaataattgtGTATTTCTAATGTTTAAAACAGCTCAAGTTGACCCCCAAAACCAGTGGTTCAGCATGAACAGGTTAATGAACAGTAGTAGTTATTAATCCGAAGGATGTAAATATTTACCtttactaaataactaaaacagaACCTCTACAGGATTCTGAAGGTTGTGAAAGCTTTTAGTCTGTGGATTATAAAACCACACTAGACCTTTTTGTACTTAAAACCTCTGTGTGATGTTTAGACACAAAGTCCTGTGCTGCTTACTCACACAGATTAAATTCAGtataagaaaatgttttaaaaagcagacATGGTGGTCCACACCACAgataacagtacagtacagaagtGTCATCAGCACGGACTGTCCAGTAATAAAAGTTCTCTCTGGATGCATTTCCAGTTCCAGACCCACTTCATCCCCAACACCACAGAAAGTCTGACCTCAGGAGGCCTGAAGATGAGGACTCCAGTGGACCAGTATGTGGTGTCCAGACCACTCTACACAGAGGACTCGTTTACAGAAAATCATGAGAAAGTGGAGAGGAAACACAAGACCACACTGGACCACGTTAAGCAGTACTTCACTTGTGATTCTAAGCGTGTGAAGAATGCAGCGTTATCTCTGGTGCCCATTGTTGGATGGATGAAAATGTACAGGGTTAAAGAATGGCTGCTGGGTGATATAGTGTCTGGAGTCAGTACTGGACTGGTGGCTATACTGCAAGgGTTGGCGTACAGTTTACTGGCGTCTCTCCCGGCCTGGTATGGATTATATGCTGCCTTTTTCCCCGTAATCATCTACTTTTTCCTGGGCACGTCTCGACACATTTCTGTGGGAGCCTTTCCTGTTCTGAGTTTGATGGTAGGGGCGGTGGTAACCAGAATGGTTCCTGATGGAGGGCCTACAGTCAACATCACAGGTTTAGAGGGGCTGTCTATTGATGATCAGAGAGCCATGGTGTCTGCCTCACTGACCTTCCTCATTGGCATTTTCCAGCTGGGTATGGGACTGCTGCAGGTCGGCTTCGTCGTTATTTACCTGTCAGACACTCTAGTGTCCGGATTCACCACGGCTGCTGCAGTTCACATCCTGATCTCTCAGCTGAAGTTTATATTCGGGCTGAGTGTACCAGGTTTCAGCGGACCACTCGCCATTTCTCAGATCCTGGAGAGTATCTTCACCCAGATCACCTCCACAAACATCCATGATCTGGTTACTGCTattgtggtgatggtggtggtgttcGCAGTGAAGGAGATCAATGAAAGATTCAAGTCAAAGCTTCCGGTGCCCATCCCCATCGAGGTCATCATGACCATCATAGCATGCGGTGTCTCCTATGCTTTCAATTTCAAAGACAATCACGGAGTGGATGTTGTAGGATTAATACCAGACAGTTTTGAGACGCCCGTGGCTCCTAATATTGAGGTCTTTAAAGAGACAGCAGTGGATGCGTTCCCCATGGCCATAGTGGGATTTGCTATTTCTTTCGCTGTTGCTAAAGTCTACGCTGTCAAACATGACTATGTCATCGATGGAAACCAGGAGCTTATTGCTTTTGGGGTGAGTAACATCTTTGGTGGAGCTTTCAAGTCACTGGCATCCAGCACAGCTCTATCCAGAAGTGCAGTGCAGGAGAGCACTGGAGGCAAAACACAGATTGCTGGCATTCTCTCTGCCATCATTGTCCTCATCGTGACCTTGGCTATAGGATTCCTGCTGGAGCCACTGCCAAAGTCTGTTCTGGGTGCAGTGGTCATAGTGAATCTGAAGGGGATGCTGATGCAGATGCGTGAAGTCCCTTACCTGTGGAAGAAGGATCGTTTGGACTGCATTATCTGGATAGTAACCTTTCTGGCTTCCATCTTTCTGGGGCTGGATCTGGGGTTGGCTGTGGGGCTCGGAGTGGAGCTGCTTGCTGTGGTCTTCCGCACCCAGTTCCCACGGTGCTCTGTCCTGGCAAACATATCTGGCACAGACATTTACAGAGATCGTAAGGACTACATTAATATATATGAACCAGAAGGGGTGAAGATTTTCAGAATTCCGGCACCAATCTTCTtcgcaaatattgatttcttcaGAGGCAAACTGCTCGATGCTGTGGGCTTCAACCCTCTGAGAATTCTGAGGAAGAGAAATAAGGCCCTGAGGAAGATCAGGAAGCTGATAAAGAAGGGGGAACTATCGGTCACTATTAAAGGGCTGCAGGTCACAGGATCTTATCCTATTGAGGAGTCTGAAGATGAGACCAACACTGAGGAGTTAGATCAGCCAGTGGACTTCTCAGACCTTCCTGTTCAGGTGAACTGGAGAGCTGAGCTTCCTGCCAACATCTCCGTTCCTCCAGTGGACATCCACAGCCTTGTGCTGGACTTCTCTGCTGTCTCCTTCATCGACATCTCAGCTCTGAAGGGACTTAAAACTGCTTTAAAGGAGTTCATCCGTATTGATGTTGAGATCTACATCGTGGCCTGTGACCCATACATCATTGAGAAACTGAAAAGCTGCAGTTTCTTTGATCATGAGATTAAGACATCCATCTTCTTCGTGACTCTCCACGATGCAATGCTGCACATTCTCGAGCGACATCCCCCTCTGAGTGTGAGCGAAAAGGTCTACAACAACTACCCTGACAAGATGCCTAATAGCAGTAGCAACTTGCGCAGCAGAGAAAAAATAGGCAAGGAGCCAGAGACCAAGTTTTAACGGATGTTGTATCAAAGTCTTCCAAGTTTGCTGAAAACCATTACATGGTGTCTGATGCTGGACCCTGTGAAGCTgcagaaaatattaatttaataactttttGTTAAATCAatcatttgtacatttttaaatgtattgggaTAAATTGGTTCTTAGAGAGTGGCATGTTTTACAGATGAAGACAGTGAAGACACAGTCAATCCAATAGACAATCTTTAGTCTCTAGACTGCTGAAAAACAAATGTAGATACATACACTGCCATTtttgtatatgtaaatatatgtagtaTAGTATTGGCATTAAATATGTGTGCAtattgttgctatttaaataaatgaatttccaacacttaaaa

Function

NR:

description
PREDICTED: chloride anion exchanger-like

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0008272 sulfate transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0008271 secondary active sulfate transmembrane transporter activity molecular_function

KEGG:

id description
K14078 SLC26A3, DRA; solute carrier family 26 (chloride anion exchanger), member 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671243.1 True 3131 mRNA 0.44 20 3868738 3889640

Neighbor

gene id symbol gene type direction distance location
LOC103036484 NA coding downstream 3002 3855542 ~ 3865736 (-)
LOC103030485 NA coding downstream 30236 3834332 ~ 3838502 (-)
rint1 rint1,LOC107725664,LOC107733011,LOC107553890,LOC107664862,LOC107695894,LOC107590313 coding downstream 165508 3695187 ~ 3703230 (-)
LOC103044476 NA coding downstream 397185 3467202 ~ 3471553 (-)
grip1 grip1 coding downstream 842871 2673173 ~ 3025867 (-)
LOC103029733 LOC108438795 coding upstream 10561 3900201 ~ 3915629 (-)
LOC103029416 LOC108438794 coding upstream 29377 3919017 ~ 3930603 (-)
wnt7b wnt7b,wnt7ba,LOC103028473,LOC107695867,LOC107725526,LOC107732964 coding upstream 79206 3968846 ~ 3990482 (-)
LOC103027117 LOC103027117,LOC108438787 coding upstream 211325 4100965 ~ 4114368 (-)
phyh phyh,LOC107743808 coding upstream 227098 4116738 ~ 4121756 (-)
G61746 NA non-coding downstream 13777 3788102 ~ 3854961 (-)
G61754 NA non-coding downstream 17622 3847028 ~ 3851116 (-)
G61670 rap1b,LOC106576640,LOC107695907 non-coding downstream 226221 3562771 ~ 3642517 (-)
G61630 NA non-coding downstream 352923 3512201 ~ 3515815 (-)
G61611 NA non-coding downstream 469968 3398558 ~ 3398770 (-)
G61760 NA non-coding upstream 47044 3936684 ~ 3937790 (-)
G61785 NA non-coding upstream 119797 4009437 ~ 4009943 (-)
G61818 NA non-coding upstream 121148 4010788 ~ 4013340 (-)
G61833 ppara non-coding upstream 184129 4073769 ~ 4075972 (-)
G61837 NA non-coding upstream 194084 4083724 ~ 4099381 (-)
cdpf1 cdpf1,LOC107695897 other downstream 22269 3840601 ~ 3846469 (-)
G61676 NA other downstream 210470 3650845 ~ 3658268 (-)
mdm1 NA other downstream 320036 3529520 ~ 3548702 (-)
G61587 NA other downstream 553499 3314153 ~ 3315239 (-)
LOC103031776 NA other downstream 1334385 2464834 ~ 2534353 (-)
LOC103039416 cald1a,LOC108425386,LOC107656362,LOC107725991,LOC107658884,LOC107710121 other upstream 445478 4335118 ~ 4426156 (-)
G61942 NA other upstream 732573 4622213 ~ 4622577 (-)
G62377 NA other upstream 2484829 6374469 ~ 6374980 (-)
pphln1 pphln1,LOC108279830 other upstream 2743370 6633010 ~ 6695389 (-)
G62484 NA other upstream 2781970 6671610 ~ 6737948 (-)

Expression


Co-expression Network