G113203


Basic Information

Item Value
gene id G113203
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 23623064 ~ 23623381 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU152977
attatcaaatcaaatcaaatcaaatttatttgtatagcgctttttacaacaggtgttggcacaaagcagctttacagaaacatgattacaggacaaagaatcaggcaaaacattacacatagaaaatacagaatacagaacccccagtgagcgcggaggcaaggaaaaactccctcagagctgcaggaggaggaagaaaccttgggaggaccaagactcacatttgaggggggaccatcctaccactggtcaaacggcttttaaattaaaatttaaaaagtcttttatacatccatataggttttatgtactcaggag

Function

NR:

description
PREDICTED: chemokine-like receptor 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU152977 True 318 lncRNA 0.39 1 23623064 23623381

Neighbor

gene id symbol gene type direction distance location
LOC103047745 NA coding downstream 25318 23589988 ~ 23597746 (-)
sys1 sys1,LOC107587582,LOC107744372,LOC106565403 coding downstream 78770 23540708 ~ 23544294 (-)
snrpc snrpc coding downstream 87780 23529197 ~ 23535284 (-)
c13h6orf106 c11h6orf106,cunh6orf106,zgc:101577,LOC107595408,LOC107724532,LOC107666165 coding downstream 144573 23460518 ~ 23478491 (-)
spdef LOC108271967,LOC108433664,LOC107744410,LOC107724522,LOC107595455,LOC107587644,LOC107666045,LOC107696418 coding downstream 197348 23404266 ~ 23425716 (-)
tnnt2 tnnt2,LOC108441587 coding upstream 330014 23953395 ~ 23990833 (-)
csrp1 csrp1,LOC108441585,LOC104918388,LOC100698513,LOC102788777,LOC101487148 coding upstream 403804 24027185 ~ 24038827 (-)
LOC103034389 NA coding upstream 798776 24422157 ~ 24459170 (-)
nol11 NA coding upstream 1259512 24882893 ~ 24894218 (-)
c13h17orf58 cunh17orf58,LOC102781445,LOC105900187 coding upstream 1362330 24985711 ~ 24999893 (-)
G113194 NA non-coding downstream 52089 23570726 ~ 23570975 (-)
G113188 NA non-coding downstream 83715 23538271 ~ 23539349 (-)
G113181 NA non-coding downstream 119035 23503808 ~ 23504029 (-)
G113174 NA non-coding downstream 129377 23458700 ~ 23493687 (-)
G113146 NA non-coding downstream 379134 23243521 ~ 23243930 (-)
G113208 NA non-coding upstream 16760 23640141 ~ 23640359 (-)
G113260 NA non-coding upstream 41265 23664646 ~ 23762140 (-)
G113267 NA non-coding upstream 62892 23686273 ~ 23686831 (-)
G113270 NA non-coding upstream 70988 23694369 ~ 23694962 (-)
G113269 NA non-coding upstream 74514 23697895 ~ 23703421 (-)
LOC103040267 LOC108433657 other downstream 59257 23559101 ~ 23563807 (-)
G113190 NA other downstream 70000 23552349 ~ 23553064 (-)
LOC103039435 tusc2,LOC108433681,LOC103039435,LOC107696420,LOC107595412,LOC107724521 other downstream 311051 23299228 ~ 23312013 (-)
LOC111193684 NA other downstream 1017926 22594412 ~ 22605138 (-)
LOC111193749 NA other downstream 1145736 22473702 ~ 22477328 (-)
G113276 NA other upstream 112573 23735954 ~ 23793461 (-)
G113304 NA other upstream 277742 23901123 ~ 23901498 (-)
tnni1 tnni1,tnni1b,LOC103040607,LOC106582713 other upstream 381168 24004549 ~ 24016801 (-)
ctsa NA other upstream 2011923 25635304 ~ 25686577 (-)
G113826 NA other upstream 2409514 26032895 ~ 26062284 (-)

Expression


Co-expression Network