c13h6orf106 (c11h6orf106,cunh6orf106,zgc:101577,LOC107595408,LOC107724532,LOC107666165)


Basic Information

Item Value
gene id c13h6orf106
gene name c11h6orf106,cunh6orf106,zgc:101577,LOC107595408,LOC107724532,LOC107666165
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 23460518 ~ 23478491 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022675563.1
GCTTCGTTCTTTTACCCCCTCAGAATAGCAACAGCTGACGTGCCCCTCCGCCCCCCATCTacccttccctccctccctcctcctcccacTCCGCCGGGTGACGTCACGCGTGGCCCTCGGCCATGCGTACTGAGCTTGTTGTTGACTCGGTTGTTATGAGTGGAGAAGAAGGCCTCGGATTCAATTAAGAACTTCTCCCGCCGCTGCCCCGGGGACCCCCTGCCGATGGAGGGCATGGACATAGACCTGGACCAGGAGCTCATGCAGAAGTTCAGCTGCATGGGCACCACGGACAAAGATGTCCTCATCTCCGAGTTCCAAAGACTGCTGGGCTTCCAGCTCAACCCCGCTGGCTGCGCCTTCTTCCTAGACATGACCAACTGGAATTTACAAGCAGCAATTGGAGCTTATTATGACTTTGAGAGTCCGAACATCAACACGCCATCGATGTCTTTTGTAGAAGATGTGACTATAGGGGAGGGAGAGTCTGTGCCTCCCGAAACACAGTTCACAAAGACATGGCGGATACAAAACACAGgtgcaGAGTCGTGGCCCCCAGGCGTGTGTCTGAAGTACATAGGAGGGGATCAGTTTGGTCATGTGAATATGGTGATGGTGCGATCTTTGGAGCCACAGGAGATCTCAGATGTCAGTGTACAGATGCGCAGTCCAGCTAATCCAGGCATGTACCAGGGCCAGTGGAGAATGTGCACAGCCACCGGGCTCTTCTACGGAGACGTGATCTGGGTGATCCTCAGTGTGGAGGTCGGGGGTCTTCTTGGAGTCACGCAGCAGCTGTCCTCCTTCGAGACGGAGTTCAACACTCAGCCACACCGTAATGTAGAGGGAGACTTCAACCCCTTCGCTTCACCACAGAAGAACAAGCAAGACCCCAACGAGGATAACCTAAAGGACCCTGGAGGCCCTTGGGTGGCCCCTCTGGACTCCATTCAGCAAGATCAAAATGGACTCTCTCACAATTCTGTAAATATTACACCAAATGGTCTCCAAAACAACTTATCGGTAGTGACTTACAGCCAGGGCTGCCACGGGCCCTACCCTTTTGGACAGTCTTAAGGGACAGAAATCATCACCATCTGGAATCCCCCCCTTTTCTGTGGGGAGTAACAGATTTATTATAAAGACTTGGCAACCCTCCTCTCCCCATGCATCACAACACGACCTAAGATAGACAAGGCTGCTTGGTTCTAAATCAGCGTCTGGCCGTTGTCAACACCTGAGTTACGCATGTGTGAATGCTAAGTTAAGATGAGTGCTAGAAATCCTCAAAGTCAAATACAcaggtttattttttgttttttttgggggggtctGTTTTGTCTCAAACCGTAGGTTTAAAGTGAGAGATttgacttgtgtgtgtgtgtgagtgcgtatGTACATTacgtatgtatgtgtatatgtacatatgcgtgtgtgtttgtgtgtgtgagtaagatGCACAAAAGAGAAGTGAAAAAAAGCCATTGAAAAGAGTTTTTGCTTGTTaagtagttttatattttacattgatgTTCTTGATGACTTTTACTTTGCAAAACTGAATGATTTTACTGAAAATCCAGCGATtgtctacattaaaaaaaacataaaaaaaagcaggAGTCATCCTGTACTGCTCAATAGAACTGTGGAATtggttaaattatattaaaatttccTTCTTACACTTCTTTAAATGATTCTCAAGGCTTTTGCCTTGGTTTATTTAGTCCTAATTTATTATCGCTGATCTTAATCTTAACTCCACAGACCTTTACAAACCGATCTCACGTCAGGATCAGTCCACAAACCCAACAGTAGTGCTTGTTGGAGGCCAGAAGATGGAACCGTTGAACCTATGAACAGAACACACCCTTTTACAGCTCTGTTATACTGGAAAACCTACATGCTTAGCAGCCCCTTCGGTCATTGAGGACTTGTATCACAATTGCACTGAGCTACACTGAGCTCCCACTTGAAAGCCCTGATGATCTCGTTGTTGCAGTTGCTTGTGCGGACagttcgttttttttctcccccgTCTGAAGCTTTAAAGGCTGACAGCTTTtgagtgcaagtgtgtgtgtgtgtgtgtgagagagtgtatgtaagcgagtgtgtgtgtgtgttgtggctTAAATCCTAGGAGCTCACGCCTGGGGCACAGACGTTTGACTCAAGCGTTCATTTCATTACGGCTTGCTGGTTTCTCTAATGCGAGAGTCCCCAAAGCACATGATTGTTTGACACTATTAGTCAGCTTCGCCACGTTTGTTTATTCGTTTATTTGTCTAttcatttctttgtttgttattcAATTCACCACTATTAATCAAAAATGATCTGCACTGTTTCGAATCTCAAGAGTTGAGGTTTTATGGAGGATGTCTTTTGAACTGTCTTTATTCTCTTGGTTTTTGAATGTGCTCTTTCCTAAAATCCCCAAATTACCAATTACACTTGCTGgaaaaactcaaaaataaaacctatatgAATGCA

Function

NR:

description
PREDICTED: uncharacterized protein C6orf106 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022675563.1 True 2502 mRNA 0.46 5 23460518 23478491

Neighbor

gene id symbol gene type direction distance location
spdef LOC108271967,LOC108433664,LOC107744410,LOC107724522,LOC107595455,LOC107587644,LOC107666045,LOC107696418 coding downstream 34802 23404266 ~ 23425716 (-)
rps10 rps10,LOC107595410,LOC102793608 coding downstream 112528 23341712 ~ 23347990 (-)
LOC103039131 LOC108433682 coding downstream 171635 23281813 ~ 23288883 (-)
LOC103041502 NA coding downstream 186705 23267555 ~ 23273813 (-)
LOC103024805 cacna2d2,LOC108433686,LOC108271986 coding downstream 367553 22670156 ~ 23092965 (-)
snrpc snrpc coding upstream 50706 23529197 ~ 23535284 (-)
sys1 sys1,LOC107587582,LOC107744372,LOC106565403 coding upstream 62217 23540708 ~ 23544294 (-)
LOC103047745 NA coding upstream 111497 23589988 ~ 23597746 (-)
tnnt2 tnnt2,LOC108441587 coding upstream 474904 23953395 ~ 23990833 (-)
csrp1 csrp1,LOC108441585,LOC104918388,LOC100698513,LOC102788777,LOC101487148 coding upstream 548694 24027185 ~ 24038827 (-)
G113146 NA non-coding downstream 216588 23243521 ~ 23243930 (-)
G113142 NA non-coding downstream 241079 23219209 ~ 23219439 (-)
G113088 NA non-coding downstream 256044 23204259 ~ 23204474 (-)
G113082 NA non-coding downstream 397659 23062440 ~ 23062859 (-)
G113080 NA non-coding downstream 409085 23051009 ~ 23051433 (-)
G113181 NA non-coding upstream 25317 23503808 ~ 23504029 (-)
G113188 NA non-coding upstream 59780 23538271 ~ 23539349 (-)
G113194 NA non-coding upstream 92235 23570726 ~ 23570975 (-)
G113203 NA non-coding upstream 144573 23623064 ~ 23623381 (-)
G113208 NA non-coding upstream 161650 23640141 ~ 23640359 (-)
LOC103039435 tusc2,LOC108433681,LOC103039435,LOC107696420,LOC107595412,LOC107724521 other downstream 148505 23299228 ~ 23312013 (-)
LOC111193684 NA other downstream 855380 22594412 ~ 22605138 (-)
LOC111193749 NA other downstream 983190 22473702 ~ 22477328 (-)
LOC103026049 slc38a3b,slc38a3,LOC108411719,LOC107666102,LOC108271853,LOC107723914 other downstream 1030134 22376312 ~ 22430384 (-)
G112778 LOC103032844,LOC108430042,LOC108246801,LOC105893128 other downstream 1807784 21601244 ~ 21652734 (-)
G113190 NA other upstream 73858 23552349 ~ 23553064 (-)
LOC103040267 LOC108433657 other upstream 80610 23559101 ~ 23563807 (-)
G113276 NA other upstream 257463 23735954 ~ 23793461 (-)
G113304 NA other upstream 422632 23901123 ~ 23901498 (-)
tnni1 tnni1,tnni1b,LOC103040607,LOC106582713 other upstream 526058 24004549 ~ 24016801 (-)

Expression


Co-expression Network