LOC103041502


Basic Information

Item Value
gene id LOC103041502
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 23267555 ~ 23273813 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022675552.1
GTAACCGATCTCAGGTCAGGTTTATTTGCTCGGGTCTGGGAGCAGCAGCGGCTCCGCCTCTCTCTGAGCTGCTCTCAGGATTCGGTTCCTCTTTTCTCGGTGAACGCGGGCCACAGTCACGAGCTCGCTCGGGTTATGTAGAGCTGCTGGTCGCTGGTTAATCAGAGAGCGGTATGGATGCTACCTGCCGGACGGGTCCTCTGATCTTCCTCTGTGTTTTTGTGACTTTTCCGGTCTTGGCATGGCCAAGAAGTGGCCTGAAGTCCTTGCCTCACCTCCCGTTCTTCACGGTCTGGAACGCTCCTACTGAGACTTGTGCCACTCGCTATGGTGTTGAACTTGATTTGAGCGTCTTTGACATTGTCCACAACAAGAATCAGACGTTTATTGGTAAGAACATTGCTATCTTCTACTCGGACAAGTTTGGTTTATATCCTCACTATGATCATCAAAAAATATCGGTGTATGGAGGTGTTCCTCAGAACGCCAGCCTCAGCGACCACATCTGGCAGGCTGACTCTGACCTGAGGAAGGCCGTCCCAGATCGAGACTTCCACGGACTGGCTGTACTTGACTGGGAAAGCTGGAGACCACTCTGGGAACGGAACTGGGACAGTAAAGAGGTGTATTGGCAAGGCTCTAAAGTACTGGTGAAGAACAAGCATCCAGACTGGAGGCCAGAGCAGATTGAAGCAGAGGCTGAGAAAGACTTCGAAAAGGCAGCACAGGCCTTCATGGTGGAGACCCTGAAACAGTGCCAGAGTGAACGGCCCAAGGGACTTTGGGGCTTCTATGGGTTCCCCTGCTGCTACAACTACCAGTATAAGAAGAATGGCACCTACACCGGAGAGTGTCCACCACAAGAACTGAAGAGGAACGACAGGCTATCTTGGTTGTGGAACGTGAGCACGGCTCTGTACCCTGATATTTACCTGGATCTGGGGCTGAGGCGACACAACCATGATATTCTGCTGTACTCCCGACATCGAATCCTGGAGGgattgagagtgagagagttggTGAATCCCATCAAACCACCAGTTATACCCTACGCCCGTATCGTCTTTACATACTCGCTGGAGTTCCTCACACAGGAAGAGCTGGTTTATACTATTGGAGAGAGTGTTGCATTAGGGGCTGCAGGAATTGTGCTTTGGGGAGATGCAACCTTCTCCAAAAGCAAGGGAACCTGTCAGGCGGTGAAGGACTACCTGGACACCACGCTGGGCCGGTATGTGGTCAATGTGACCGAAGCTGCATCCGTGTGCAGCCAGGCCTTGTGTTCGGCCCGGGGTCGATGCCAGAGACGGGACCCGGGCTCTGGAGCCTACCTCCATCTAGACCCAGCCGTGTGGAACATCGTCCACAGAGCAGATCCTCCGGACGGGCCACCAGATGGTCCATCGTATCTGATAGAGAGGAGAGTGAGCAGTGATGAGGGGGAGAGGAGCAGATTTATAGAGCTGTTTAAGTGCCAGTGTTTCCCAGGCTGGGAAGGAGAACACTGCCAGAAACAGGTTGGTAGCTTTGAGAAACTGTGAGCAAACTTCTTTgaaagttttaaagttatataaaatcaaatataaaactGGAAGAAATTCTCAGTGTAATCAGCTCTATTAAAACTTCACTATAACTTAA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016798 hydrolase activity, acting on glycosyl bonds molecular_function

KEGG:

id description
K01197 hya; hyaluronoglucosaminidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022675552.1 True 1641 mRNA 0.51 4 23267555 23273813

Neighbor

gene id symbol gene type direction distance location
LOC103024805 cacna2d2,LOC108433686,LOC108271986 coding downstream 174590 22670156 ~ 23092965 (-)
mst1 mst1,LOC107707265,LOC107666157,LOC107595414 coding downstream 621964 22611506 ~ 22645591 (-)
LOC103023031 gnb1,gnb1b,LOC105895937,LOC108272010,LOC107666091,LOC107595416,LOC103044197 coding downstream 707266 22516156 ~ 22560289 (-)
LOC103023872 rbm5,LOC108433690,LOC108271979,LOC107696464 coding downstream 795963 22455022 ~ 22471592 (-)
LOC111193663 LOC108433669 coding downstream 817156 22445889 ~ 22450399 (-)
LOC103039131 LOC108433682 coding upstream 8000 23281813 ~ 23288883 (-)
rps10 rps10,LOC107595410,LOC102793608 coding upstream 67899 23341712 ~ 23347990 (-)
spdef LOC108271967,LOC108433664,LOC107744410,LOC107724522,LOC107595455,LOC107587644,LOC107666045,LOC107696418 coding upstream 130453 23404266 ~ 23425716 (-)
c13h6orf106 c11h6orf106,cunh6orf106,zgc:101577,LOC107595408,LOC107724532,LOC107666165 coding upstream 186705 23460518 ~ 23478491 (-)
snrpc snrpc coding upstream 255384 23529197 ~ 23535284 (-)
G113146 NA non-coding downstream 23625 23243521 ~ 23243930 (-)
G113142 NA non-coding downstream 48116 23219209 ~ 23219439 (-)
G113088 NA non-coding downstream 63081 23204259 ~ 23204474 (-)
G113082 NA non-coding downstream 204696 23062440 ~ 23062859 (-)
G113080 NA non-coding downstream 216122 23051009 ~ 23051433 (-)
G113174 NA non-coding upstream 184887 23458700 ~ 23493687 (-)
G113181 NA non-coding upstream 229995 23503808 ~ 23504029 (-)
G113188 NA non-coding upstream 264458 23538271 ~ 23539349 (-)
G113194 NA non-coding upstream 296913 23570726 ~ 23570975 (-)
G113203 NA non-coding upstream 349251 23623064 ~ 23623381 (-)
LOC111193684 NA other downstream 662417 22594412 ~ 22605138 (-)
LOC111193749 NA other downstream 790227 22473702 ~ 22477328 (-)
LOC103026049 slc38a3b,slc38a3,LOC108411719,LOC107666102,LOC108271853,LOC107723914 other downstream 837171 22376312 ~ 22430384 (-)
G112778 LOC103032844,LOC108430042,LOC108246801,LOC105893128 other downstream 1614821 21601244 ~ 21652734 (-)
LOC103040822 LOC108429994 other downstream 1682076 21581745 ~ 21585479 (-)
LOC103039435 tusc2,LOC108433681,LOC103039435,LOC107696420,LOC107595412,LOC107724521 other upstream 25415 23299228 ~ 23312013 (-)
G113190 NA other upstream 278536 23552349 ~ 23553064 (-)
LOC103040267 LOC108433657 other upstream 285288 23559101 ~ 23563807 (-)
G113276 NA other upstream 462141 23735954 ~ 23793461 (-)
G113304 NA other upstream 627310 23901123 ~ 23901498 (-)

Expression


Co-expression Network