G121381


Basic Information

Item Value
gene id G121381
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035910.1
NCBI id CM008313.1
chromosome length 38842236
location 12022609 ~ 12031011 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU163752
CAGAAAGGCCAGTCTCACCTGGATCCAGCTGTGTGTCCTACAAGAGTGCACAGTCAATGGGAGAACCTCCCACCCTCAAGAAAGAATCAGTCCCTCAAGACAGtggAACTGCAGAAAGGCCAGTCTCACCTGGATCCAGCTGTGTGTCCTACAAGAGTGCACAGTCAATGGGAGAACCTCCCACCCTCAAGGAAGGATCAGTCCCTAAAGACAGtggAACTGTAGAAAGGCCAGTCTCACCTGGATCCAGCTGTGCGTCCTTCAAGAGTGCACAGTCAATGGGAGAACCTCCCACCCTCAAGAAAGGATCAGCCCCTCAAGACAGtgGAACTTCAGAAAGGCCAGTCTCACCTGGATCTAGCTGTGCGTCCTACAAGAGTGCACAGTCTATGGGAGAACCTCCCACCCTCAAGAAAGGATCAGCCCCTCAAGACAGtgGAACTTCAGAAAGGCCAGTCTCACCTGGATCTAGCTGTGTGTCCTACAAGAGTGCACAGTCTATGGGAGAACCTCCCACCCTCAAGGATGGATCAGTCCCTCAAGACAGTGGAACTGTAGAAAGACCAGTCTCACCTGTATCCAGCTATGCGTCCTACAAAAGTGCACAGTCAATGGGAGAACCTCCCACCCTCAAGGAAGGATTGGTCCCTCAAGACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163752 True 658 TUCP 0.53 7 12022609 12031011

Neighbor

gene id symbol gene type direction distance location
LOC103037906 NA coding downstream 106345 11874988 ~ 11916264 (-)
LOC107197275 NA coding downstream 163690 11829096 ~ 11858919 (-)
LOC103024948 NA coding downstream 270824 11741279 ~ 11751785 (-)
LOC103026606 nxf1,LOC108278769,LOC107669360,LOC107715364,LOC107559416 coding downstream 302749 11708184 ~ 11719860 (-)
LOC103028746 NA coding downstream 409891 11606619 ~ 11612718 (-)
LOC103031789 NA coding upstream 86099 12117110 ~ 12162942 (-)
pde8b pde8b,LOC107662428,LOC107701941 coding upstream 386007 12417018 ~ 12494724 (-)
aggf1 aggf1 coding upstream 466052 12497063 ~ 12516548 (-)
LOC103034580 LOC108415281 coding upstream 663223 12694234 ~ 12699607 (-)
LOC107196827 NA coding upstream 677916 12708927 ~ 12714639 (-)
LOC111193894 NA non-coding downstream 112765 11908974 ~ 11909844 (-)
G121369 NA non-coding downstream 126160 11889962 ~ 11896449 (-)
LOC107197290 NA non-coding downstream 181316 11840628 ~ 11841293 (-)
G121353 NA non-coding downstream 224842 11789195 ~ 11797767 (-)
G121343 calm1,LOC107670363,LOC105896953,LOC102778633,LOC102293206,LOC107396020 non-coding downstream 234728 11783408 ~ 11787881 (-)
G121412 NA non-coding upstream 25232 12056243 ~ 12059146 (-)
G121414 NA non-coding upstream 29714 12060725 ~ 12061533 (-)
G121420 NA non-coding upstream 82608 12113619 ~ 12115370 (-)
G121490 NA non-coding upstream 318149 12349160 ~ 12414902 (-)
G121492 NA non-coding upstream 322521 12353532 ~ 12368535 (-)
LOC107197484 NA other downstream 10232 11983414 ~ 12012377 (-)
G121377 NA other downstream 55832 11941794 ~ 11966777 (-)
G121351 NA other downstream 243737 11774904 ~ 11778872 (-)
LOC111193892 banf1,LOC105010953,LOC108439777,LOC105907417,LOC105019098 other downstream 257521 11761126 ~ 11765088 (-)
G121209 NA other downstream 657122 11363377 ~ 11365487 (-)
LOC103031472 fam69b,LOC107720916,LOC107585388,LOC107661609,LOC107675805,LOC107752932 other upstream 31278 12062289 ~ 12080374 (-)
s100z s100z other upstream 427297 12458308 ~ 12638596 (-)
LOC103033397 NA other upstream 671071 12702082 ~ 12707372 (-)
G121674 NA other upstream 894540 12925551 ~ 12927602 (-)
G121803 NA other upstream 1784245 13815256 ~ 13822434 (-)

Expression


Co-expression Network