G125091


Basic Information

Item Value
gene id G125091
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035910.1
NCBI id CM008313.1
chromosome length 38842236
location 26897520 ~ 26898105 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU168894
accgtggaggtttttaactgtaccgtggaggtttttaactgtaccgcggagttttttttaactgtaccgcggaggtttttaactgttttaactgtcctgcagagctttttaactgtcctgtggagcttttaactgtgcCGCAATGTGATACATTGTGTCTTATCTTAGTTTTTTTGAGACGACTTAAGACTTATGAGATAATTCCCCTAGATTTGACCATCAAatctattatataatattgtcataatacaaaatatcaaatatcaaaaatagTATGACTTTAAATTAATAACTAATATGGACACAGGTAACGACCTTGTTCATGTCtgcacacacattacatgtgtATTTAGCCTAATCTCACAGTTATCACACTCATATATCTCTTTTATATTCTATATCACATTCtggtataattatattttttattattcatttttttctgatgtgtgtgtacttatgtgtgtctgtatataaGTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU168894 True 481 lncRNA 0.32 2 26897520 26898105

Neighbor

gene id symbol gene type direction distance location
LOC103039531 LOC103039531,LOC108439545 coding upstream 72727 26816537 ~ 26824793 (+)
LOC103044552 col27a1a,LOC108439562,LOC108279101,LOC107585625,LOC107737153,LOC107705943,LOC107675693,LOC107584663 coding upstream 125847 26679073 ~ 26771673 (+)
LOC111193926 loxhd1,LOC107599385,LOC107705957,LOC107661623 coding upstream 284049 26591866 ~ 26613471 (+)
LOC103044265 loxhd1,LOC107737181,LOC107675695 coding upstream 305176 26561481 ~ 26592344 (+)
st8sia5 st8sia5,LOC107737155,LOC107705967 coding upstream 356710 26518665 ~ 26540810 (+)
stbd1 NA coding downstream 95208 26993313 ~ 26997845 (+)
shroom3 LOC103156599,LOC103373559 coding downstream 119508 27017613 ~ 27100940 (+)
ccng2 ccng2,LOC107720902,LOC107661592,LOC107675753,LOC107584590 coding downstream 239731 27137836 ~ 27143258 (+)
LOC103041500 wdr38 coding downstream 281284 27179389 ~ 27188203 (+)
LOC103042105 prodha,LOC108439536,LOC107661597,LOC106564257 coding downstream 302310 27200415 ~ 27221677 (+)
LOC111193931 NA non-coding upstream 17858 26867532 ~ 26879662 (+)
G125078 NA non-coding upstream 41206 26853542 ~ 26856314 (+)
G125067 NA non-coding upstream 63194 26832373 ~ 26834326 (+)
G125036 rpl28,LOC107585697,LOC107675734 non-coding upstream 83429 26811874 ~ 26814091 (+)
G125056 NA non-coding upstream 108345 26788421 ~ 26789175 (+)
G125097 NA non-coding downstream 26732 26924837 ~ 26925941 (+)
G125099 NA non-coding downstream 35024 26933129 ~ 26933758 (+)
G125100 NA non-coding downstream 40178 26938283 ~ 26938491 (+)
G125134 NA non-coding downstream 165093 27063198 ~ 27063431 (+)
G125145 rpl35,LOC107675720,LOC107584597,LOC107585395 non-coding downstream 291083 27189188 ~ 27192704 (+)
LOC103030814 NA other upstream 839282 26049491 ~ 26058238 (+)
G124810 NA other upstream 918645 25950758 ~ 25978875 (+)
G124573 ddt other upstream 1462635 25431743 ~ 25434885 (+)
LOC103046504 LOC103046504,LOC108410666,LOC105005873,LOC107692298,LOC107736894,LOC107578622,LOC105896593,LOC107737864,LOC108279179 other upstream 1894143 24992462 ~ 25003377 (+)
G124391 NA other upstream 1973880 24923211 ~ 24923640 (+)
G125130 ccni other downstream 161728 27059833 ~ 27117992 (+)
LOC103041801 NA other downstream 295609 27193714 ~ 27195755 (+)
LOC111193934 NA other downstream 492787 27390892 ~ 27395962 (+)
LOC111193935 NA other downstream 669108 27567213 ~ 27576741 (+)
G125538 NA other downstream 805568 27703673 ~ 27704931 (+)

Expression


Co-expression Network