G125814


Basic Information

Item Value
gene id G125814
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035910.1
NCBI id CM008313.1
chromosome length 38842236
location 29163183 ~ 29163464 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU169892
caaatcagagaacctaaactaaaccaactagagataataaataaacagggaatatatatatataaaggaagaaactagaaataaacaaggaaataaactataaacaagaaaacaagaaataaacgagaaacaaatgACTAAGGCTATAGAAgacaaggaaacactgagatAAGCTAtggaacacagagagacaaaacaacaggggaaggtgcaaagaccgacgaaggacaagagacaaaggaaggctttatagcacacaagggaagtggaaacacctggggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169892 True 282 lncRNA 0.36 1 29163183 29163464

Neighbor

gene id symbol gene type direction distance location
LOC103027415 LOC103027415,LOC108431853 coding upstream 7025 29153396 ~ 29156158 (+)
LOC111193835 NA coding upstream 107720 29054724 ~ 29055463 (+)
LOC103027277 NA coding upstream 269227 28876003 ~ 28893956 (+)
LOC111193960 NA coding upstream 302892 28859259 ~ 28860291 (+)
LOC111193834 NA coding upstream 307619 28854371 ~ 28855564 (+)
odf2 odf2 coding downstream 131554 29295018 ~ 29316733 (+)
sptan1 sptan1 coding downstream 165463 29328927 ~ 29370499 (+)
specc1l specc1l,LOC108437337 coding downstream 227360 29390824 ~ 29418906 (+)
LOC103047110 adora2a,LOC108437362 coding downstream 284306 29447770 ~ 29459556 (+)
LOC103036346 camkk2,LOC108437385,LOC107739694,LOC107736868 coding downstream 318504 29481968 ~ 29510230 (+)
G125813 NA non-coding upstream 571 29162018 ~ 29162612 (+)
G125812 NA non-coding upstream 1563 29161144 ~ 29161620 (+)
G125810 NA non-coding upstream 3235 29159393 ~ 29159948 (+)
LOC111193939 NA non-coding upstream 99485 29059392 ~ 29063698 (+)
LOC111193938 NA non-coding upstream 186578 28974498 ~ 28976605 (+)
G125846 NA non-coding downstream 61379 29224843 ~ 29225538 (+)
G125847 NA non-coding downstream 62573 29226037 ~ 29227565 (+)
G125851 NA non-coding downstream 70526 29233990 ~ 29257189 (+)
G125880 NA non-coding downstream 126566 29290030 ~ 29294022 (+)
G125887 NA non-coding downstream 161956 29325420 ~ 29325744 (+)
G125687 fnip1 other upstream 177302 28984168 ~ 28985881 (+)
G125669 NA other upstream 241595 28918856 ~ 28921588 (+)
LOC103039679 NA other upstream 261169 28895071 ~ 28902014 (+)
G125538 NA other upstream 1458252 27703673 ~ 27704931 (+)
LOC111193935 NA other upstream 1586442 27567213 ~ 27576741 (+)
LOC111188228 specc1l,specc1la,LOC108437337,LOC107711823,LOC107667544,LOC107602822 other downstream 275290 29438754 ~ 29444678 (+)
snrpd3 snrpd3,smd3,LOC106563120,LOC105014836 other downstream 309996 29473460 ~ 29479370 (+)
G126011 NA other downstream 573834 29737298 ~ 29743633 (+)
G126040 LOC108436799,LOC104955091,LOC103374273,LOC100049520,LOC107397331,LOC101074260 other downstream 692574 29856038 ~ 29860217 (+)
G126613 LOC108415780 other downstream 3129900 32293364 ~ 32293744 (+)

Expression


Co-expression Network