G61223


Basic Information

Item Value
gene id G61223
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 1260592 ~ 1260909 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU69738
ACTGTCTCAAGGTGGAATTACTGTAATTATGAGATTCCAACTTGTAAAAAGCGTTGACGTCCTCATAGAACTCATACACTCTAAATAATGCTGGGTTGTTTCATCCCATGTTTGGATCCAATATGGACAAACCCAACTGTTGGTTTAAATTAACCTGGTTATTCATAAAACCAAGCGTTGGTTTAAATTATTTAAACCAACGTTTGGATCTGTCCATATTTGTCCCAAACATGGGTTGAAACAACCCAGTATTTTTAGAGTGTAATTACAACTTGTAAACTCAGAATTTTCTGAGAACTCCAACTTGTACCACCTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69738 True 318 lncRNA 0.36 1 1260592 1260909

Neighbor

gene id symbol gene type direction distance location
CI01000010_01247734_01250856 NA coding upstream 9680 1247734 ~ 1250912 (+)
CI01000010_01239096_01245966 RL10A, RPL10A coding upstream 14601 1239029 ~ 1245991 (+)
CI01000010_01235831_01238043 NA coding upstream 21944 1235373 ~ 1238648 (+)
CI01000010_01227374_01232982 PPARDB, PPARD, PPARB2A coding upstream 26727 1225615 ~ 1233865 (+)
CI01000010_01202099_01209001 TBC1D25 coding upstream 50419 1202099 ~ 1210173 (+)
CI01000010_01274112_01288620 NA coding downstream 13203 1274112 ~ 1288780 (+)
CI01000010_01299770_01313065 NA coding downstream 38117 1299026 ~ 1313116 (+)
CI01000010_01335600_01340362 NA coding downstream 74691 1335600 ~ 1340743 (+)
CI01000010_01353784_01361926 NA coding downstream 92875 1353784 ~ 1361998 (+)
CI01000010_01382147_01388079 NA coding downstream 121238 1382147 ~ 1388431 (+)
G61222 NA non-coding upstream 5020 1255338 ~ 1255572 (+)
G61221 NA non-coding upstream 5547 1253976 ~ 1255045 (+)
G61219 NA non-coding upstream 6853 1253068 ~ 1253739 (+)
G61220 NA non-coding upstream 7693 1252336 ~ 1252899 (+)
G61218 NA non-coding upstream 10146 1250245 ~ 1250446 (+)
G61224 NA non-coding downstream 1349 1262258 ~ 1262479 (+)
G61225 NA non-coding downstream 1663 1262572 ~ 1262869 (+)
G61181 NA non-coding downstream 6282 1267191 ~ 1267567 (+)
G61246 NA non-coding downstream 106497 1367406 ~ 1367688 (+)
G61247 NA non-coding downstream 107782 1368691 ~ 1369366 (+)
CI01000010_00946586_00947327 NA other upstream 313048 945182 ~ 947577 (+)
CI01000010_00881905_00883563 NA other upstream 377078 881195 ~ 883684 (+)
CI01000010_00826648_00831638 NA other upstream 422160 826648 ~ 832705 (+)
CI01000010_03197380_03199958 NA other downstream 1933246 3197380 ~ 3200044 (+)
CI01000010_03320340_03346243 NA other downstream 2052786 3313695 ~ 3347796 (+)
G62838 NA other downstream 2629186 3890095 ~ 3893793 (+)
G62856 NA other downstream 2676848 3937757 ~ 3939945 (+)
G62983 NA other downstream 3187263 4448172 ~ 4449327 (+)

Expression


Co-expression Network