trnav-cac_19


Basic Information

Item Value
gene id trnav-cac_19
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 8939743 ~ 8939814 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnav-cac_19
gtttctgtagtgtagtggttatcACGTTCGCCTCACACGCGAAAGGTCCTGGTTCGAAACCAGGCAGAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnav-cac_19 True 72 tRNA 0.50 1 8939743 8939814

Neighbor

gene id symbol gene type direction distance location
trnav-aac_17 NA coding upstream 118 8939554 ~ 8939625 (+)
trnav-aac_16 NA coding upstream 307 8939364 ~ 8939436 (+)
trnav-aac_15 NA coding upstream 497 8939174 ~ 8939246 (+)
trnav-aac_14 NA coding upstream 687 8938985 ~ 8939056 (+)
trnav-cac_18 NA coding upstream 876 8938795 ~ 8938867 (+)
trnav-aac_18 NA coding downstream 117 8939931 ~ 8940003 (+)
trnav-aac_19 NA coding downstream 307 8940121 ~ 8940193 (+)
trnav-aac_20 NA coding downstream 497 8940311 ~ 8940383 (+)
trnav-aac_21 NA coding downstream 687 8940501 ~ 8940573 (+)
trnav-aac_22 NA coding downstream 877 8940691 ~ 8940763 (+)
G196314 NA non-coding upstream 8384 8931149 ~ 8931359 (+)
G196286 NA non-coding upstream 90117 8849360 ~ 8849626 (+)
G196259 NA non-coding upstream 135897 8803118 ~ 8803846 (+)
G196257 NA non-coding upstream 143357 8792633 ~ 8796386 (+)
G196238 NA non-coding upstream 158787 8741530 ~ 8780956 (+)
G196317 NA non-coding downstream 398255 9338069 ~ 9338819 (+)
G196329 NA non-coding downstream 438103 9377917 ~ 9427544 (+)
G196327 NA non-coding downstream 441936 9381750 ~ 9382549 (+)
G196396 NA non-coding downstream 667708 9607522 ~ 9608821 (+)
G196411 NA non-coding downstream 772076 9711890 ~ 9712641 (+)
G196232 NA other upstream 259773 8679284 ~ 8679970 (+)
LOC103033741 grik5,LOC108433750,LOC107549838,LOC107752523,LOC100331381,LOC107666346 other upstream 534274 8143873 ~ 8405469 (+)
G195793 NA other upstream 1646050 7293313 ~ 7293693 (+)
tapbp tapbp other upstream 1812629 7120612 ~ 7127114 (+)
LOC103021434 rxrba,LOC107566635,LOC107751683,LOC107694777,LOC107729870,LOC108272672 other upstream 1992587 6922288 ~ 6947156 (+)
mrps21 mrps21 other downstream 594615 9534429 ~ 9539648 (+)
LOC103046991 celf3a,LOC108437918,LOC107750801,LOC108272714 other downstream 663513 9603327 ~ 9638916 (+)
LOC103046684 LOC106605923,LOC107589412,LOC107582081,LOC107699547,LOC108429942 other downstream 760926 9700740 ~ 9704709 (+)
G196415 NA other downstream 780969 9720783 ~ 9721270 (+)
G196419 NA other downstream 800545 9740359 ~ 9740768 (+)

Expression


Co-expression Network