G807


Basic Information

Item Value
gene id G807
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 2550216 ~ 2600511 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU1089
AAAATGGTCCCTAAAAATGGGTGTGGCTACCAAGGTGTTTAAAAGAGCATGAATCAAAttcttcaaaacaaaaaataataaataaaaaaatacaataaaatacaaaaaactagCAGTTCCTCAGGAAAGCTGTGAGGAGAACATTTCTGCACAGTTAACAGAGTCTTACTGTAAGACAACGACAATCCAAACATCTGCTGAAAGACTGTGGCAAATTCATATCGTCCAATCAGAGCGTCCGGTTCTGCGACTCTCCACCAGTCAAGCTGGGATCACTTTCACACAGGCCAGCGCTCTCGCGCTCACATTCACGATCTCACACTTTCATTCATAATGAGAGAAATGCAAAATGATGCATCAAACACTGCTTAAAACATCCAAACATCTGAAACGTGAGAACGTAAAGCATCGttctgattaaaaaataaatagtaaaaaaaaaaaaaaaaaaaaaaaagataacctTACATTCTTTCACGTTCATCAGCTCAACACAGAgaaccatttaaaaacaaataataaaagaaatcaaattttaacactctaataataacaacaagCAGCAGCGTGGAAAACAGCGCCCCCTACGCTGAACACAGGCAGTTTAATAAAGCTGAGCTTTGGCTTTAGAACCCACTTTCCCTCAGAACTGTCctcaaacactttaaacaaGACTGAAGAAGAGCCTACAGGGTTTAAAGGTCTACACTGTACTGCAGTAACACGGTTTATCTCCCATTCAGTACATTACATTCATCTTTACTCTTCTTTCTTTAGTGTTGAGCTTCGAGGAATCAGAGCCAATCCACAGTTCTTGCAGGTCTTGGTTTAATCACAGCATTAACCctgttctcctgtgtgtttctgtaacaTCTGCTTTACAGCTGAGAGATAAGACTTCCAGgtttacattacatacacaaTCTAATATACCCTCAATGAGTCTTCAATGAGTTTTTAGAAGTAGTGACCAACATTAAActggattaatattaaattactgtattataatacgCTGGAAACATTTGCAGTTCAGACTGAAGTCTGTGTCGAGTTTGAATATTGTCTGGTTGGATCATTAGCTCTTTAGCTTTGAGTGTAAAAGTAAAGAGTAGCACACATGAGCCAGTCTGCCAAATAACTCAATACTCAAACTCTCAATACTCTTCTTTGTCAACAGTTCTTTGTCTGAACACGGTGTTTtagactggttttaaaactagtCACCAACATAAACTTGAAAAAATATTGAgttattgtattaaaatgttgGAAAGATCTGCTTTTTAGACTGAAGTCTGTGTCGAGTTTAAGGATTGCTTGGTTAGATCTTTAGCTTTGAGTCTAAAAGTAAAGAGCCAATACCCTCACTGAGACAGCCTGCTCAATAATTCAATACTCAAACTCTCAGCATGGTTCTCTAGTGTTTAAACAAAGAACTGACACTGCGTTTCTGTGCATTTGAAGAGAGTTTTCGACTGTTTAAAAGTAGTGATCTGGATAAACTGGATTTaacattactgtattataatacgCTGGAAACATCGGCTGTTCAGGCAAATAATTCAAGAAGACAACTTTAATTATTTGCAGTTCTTAGTTTAAACCCAGCATTAATATTGTTCTCCTGTATTTTTACAAGCCTTAAATAGTTTTAgacttttgtaaataaataatttgatgttaaactgaataaaattaagtgtatttgtgtttaaacCTGAAAACATTTGCAGTTCTGATTAAAGTCTGGGTTGAGTTTGAAGTTTGCTTGGTTAGATCTTTAGCTTTGAGTCTAAAAGTAAAGAGCCAATATCCTCCCTGAGACGGTCTGCTCAATAATTTAATACTCAAACTCTCAACACGCTCAGATCATTGTTTAAACACTGGAGAACAAAGCAAACACTGCATTTCTGTGCATTTGAAGAGTTTGACTGTTTTTAAAAGTAGTGATCTGGATAAACTGGATTCAATATTaagtattactgtattataatatgctGGAAACATTTGCCATTCAGACTGAAGTCTGTCTGGAGTTTGAAGTTTGCTTACAGTGGAATACTTTTTACTGAGCCAGTCTGTGAAATTATTCAATACTTAAACTTTCAACACTTTTTCTTCACAGTATACGCATGCGTAAGTGTCTATGCGCGTGAGTATTCGCGTGTATGCGCGCGTGCAGGTTCATGCGCAGTCTCCCACCACCACCAGCGGGGAGAGTAGCTGGCAGAGTTCGGACGCGCACACCGGGCCGCGGTTCTGGCTGCTGGTGCGGCGGCGCTGTGCGAGGCGGGAGCGGGTGAGGGGAGAGAGGCTGGCGTGGAGGAGCAGTGAAGAGGAAGAAAAGCCgtcctcatcctcttcctcctcaaagtgcagctgctggagctgctccGCACTCTCGTCCTGCTCCGCCAGCTGCCTGTTCATCGCCACCGCCCGGCCCGCAAACACCGTC
>TU1090
AAAATGGTCCCTAAAAATGGGTGTGGCTACCAAGGTGTTTAAAAGAGCATGAATCAAAttcttcaaaacaaaaaataataaataaaaaaatacaataaaatacaaaaaactagCAGTTCCTCAGGAAAGCTGTGAGGAGAACATTTCTGCACAGTTAACAGAGTCTTACTGTAAGACAACGACAATCCAAACATCTGCTGAAAGACTGTGGCAAATTCATATCGTCCAATCAGAGCGTCCGGTTCTGCGACTCTCCACCAGTCAAGCTGGGATCACTTTCACACAGGCCAGCGCTCTCGCGCTCACATTCACGATCTCACACTTTCATTCATAATGAGAGAAATGCAAAATGATGCATCAAACACTGCTTAAAACATCCAAACATCTGAAACGTGAGAACGTAAAGCATCGttctgattaaaaaataaatagtaaaaaaaaaaaaaaaaaaaaaaaagataacctTACATTCTTTCACGTTCATCAGCTCAACACAGAgaaccatttaaaaacaaataataaaagaaatcaaattttaacactctaataataacaacaagCAGCAGCGTGGAAAACAGCGCCCCCTACGCTGAACACAGGCAGTTTAATAAAGCTGAGCTTTGGCTTTAGAACCCACTTTCCCTCAGAACTGTCctcaaacactttaaacaaGACTGAAGAAGAGCCTACAGGGTTTAAAGGTCTACACTGTACTGCAGTAACACGGTTTATCTCCCATTCAGTACATTACATTCATCTTTACTCTTCTTTCTTTAGTGTTGAGCTTCGAGGAATCAGAGCCAATCCACAGTTCTTGCAGGTCTTGGTTTAATCACAGCATTAACCctgttctcctgtgtgtttctgtaacaTCTGCTTTACAGCTGAGAGATAAGACTTCCAGgtttacattacatacacaaTCTAATATACCCTCAATGAGTCTTCAATGAGTTTTTAGAAGTAGTGACCAACATTAAActggattaatattaaattactgtattataatacgCTGGAAACATTTGCAGTTCAGACTGAAGTCTGTGTCGAGTTTGAATATTGTCTGGTTGGATCATTAGCTCTTTAGCTTTGAGTGTAAAAGTAAAGAGTAGCACACATGAGCCAGTCTGCCAAATAACTCAATACTCAAACTCTCAATACTCTTCTTTGTCAACAGTTCTTTGTCTGAACACGGTGTTTtagactggttttaaaactagtCACCAACATAAACTTGAAAAAATATTGAgttattgtattaaaatgttgGAAAGATCTGCTTTTTAGACTGAAGTCTGTGTCGAGTTTAAGGATTGCTTGGTTAGATCTTTAGCTTTGAGTCTAAAAGTAAAGAGCCAATACCCTCACTGAGACAGCCTGCTCAATAATTCAATACTCAAACTCTCAGCATGGTTCTCTAGTGTTTAAACAAAGAACTGACACTGCGTTTCTGTGCATTTGAAGAGAGTTTTCGACTGTTTAAAAGTAGTGATCTGGATAAACTGGATTTaacattactgtattataatacgCTGGAAACATCGGCTGTTCAGGCAAATAATTCAAGAAGACAACTTTAATTATTTGCAGTTCTTAGTTTAAACCCAGCATTAATATTGTTCTCCTGTATTTTTACAAGCCTTAAATAGTTTTAgacttttgtaaataaataatttgatgttaaactgaataaaattaagtgtatttgtgtttaaacCTGAAAACATTTGCAGTTCTGATTAAAGTCTGGGTTGAGTTTGAAGTTTGCTTGGTTAGATCTTTAGCTTTGAGTCTAAAAGTAAAGAGCCAATATCCTCCCTGAGACGGTCTGCTCAATAATTTAATACTCAAACTCTCAACACGCTCAGATCATTGTTTAAACACTGGAGAACAAAGCAAACACTGCATTTCTGTGCATTTGAAGAGTTTGACTGTTTTTAAAAGTAGTGATCTGGATAAACTGGATTCAATATTaagtattactgtattataatatgctGGAAACATTTGCCATTCAGACTGAAGTCTGTCTGGAGTTTGAAGTTTGCTTACAGTGGAATACTTTTTACTGAGCCAGTCTGTGAAATTATTCAATACTTAAACTTTCAACACTTGCGGTTCTTGGTTTAACCTCTTTAACTCTAGTGATAGAGCCAATATTCCAAACCCACAAACTATTGGTAAGTATTAGTTTAGTATTGTGTAGTCCCACAGGTCTCCATTTTAGGACTGAAAGTTATATGATGACTAATATACTGTAGTTattattgtaaaagaaaaaaaaatgaatttatccAGTTTAACAACTGAAAATGTGGATGTCTGTTAAGGCTGTTAAAAGTAGAGACAAACCTCTCACACTAAACAACTGTCTTAGCTGACTGACTACTTTTaacaacagtaaaaacaaaaaaaataatacttgttttttttttttagggatattttttcttttaaactccACATAAACGTTGACCGCATTGTTCTGAAGTGATCATTTAACTGGTTCACATAGTGATTCTGAAGCCAGTCAGTGGTTTGTGGGAAACTGGTGTCCAACAAGAGTCTCTTACTTGTTCTTAGCATTCAGCACATCTGAGAATGAGCTTCAATCTGAACACCCTTGAATCCATCAGGGAACTGCAAGTAGAGAACCTGAATACTGGCTTCTGTTGTGGGTCTCTGAAAGCAGACTGAATTAAAGAGCTTAAAACCAGAATTTGAGCCTTTTGTACTTCAAAATTGTACAAAATATTGCATAAACAACTAACTTTTTGTGGtttctttcatttaaaactGTGGAGGAACCTCTTATGAACCTCTTaggaacatttttaatatgcttGGAAGAACCTCCAAGAAAACTTAGTGTTTTGAGCAACTTTCAGGAACCATTTTCCTCTTAAAATCCTTTGTCCTGAAGATTCTCCAAAGCACCTTAGTGGGTTCTGCTACAGTTTCACactaaaaaaaccctaaaagaATCTTTACAAACAgaattttagaagaaaaatatattcctCAAAGCAGCATAAGGGGTTCCAAAGTTTCAAACTGAAGAACCCCCAAAAGTTCCTTAAGAAACTTAAAGCATTTAACAGTGTGCAGTGAACAAACCAACACTGTGGTCAGACAGACCCTGTTCTAAATAACAGACAAACCTGGTATCTGTCTCAGTCAGAGGTtgcataaacacaacagcgctCATCCCAGCGAGTCCAGCAAGGCAAAAATCATGAGGTTATTAATCCTGCAGAACTGAACATCCACCTGAAACGCTGCAGTGGGGTCAGCTGACTGCACCAGCAAGCAGCACTACAGGAGTCCCATTGGTTTTTCTCagttcttcagtttttttttgcctgtaaATCGATTCCCAAAGTCCAGAAGAACCAATCCTGCGATCATTAAAGACAGTCGCTTCTCGAGAACTCCCTTCAAAAACACGGAACTTCCGGGAGATCTGAGGTTTtaatgcgtttttttttcttggtaagTGCTACAGCAGGACATCCAGACCCCTCCAGCAGAACTGCTCCCAAACGGTTGTGAATTTAGCACAGCGTCCAGCTGGAGGTCCAGTAAGATCTACTGTAGGAGAAACTCCGAGATATGCTGCTGCACTGAACAGAGAGGCGCACTGAACTTGCTTGATTTAAATGTGtac
>TU1091
CCAATGCCTGTGCCAATCATTACATTATCGATTTATCAGACAATGTATGAACATAACCTCACACATTTTCACCCATATTTGATACTGTAAAGTCGATACAAAGTACTACAAACTAACTGTTGGTGTTAATAGGCTTTTATTATGCATGTGCGCATGGTGATACTCAGTTGTTCAGTtttttttttgcctgtaaATCGATTCCCAAAGTCCAGAAGAACCAATCCTGCGATCATTAAAGACAGTCGCTTCTCGAGAACTCCCTTCAAAAACACGGAACTTCCGGGAGATCTGAGGTTTtaatgcgtttttttttcttggtaagTGCTACAGCAGGACATCCAGACCCCTCCAGCAGAACTGCTCCCAAACGGTTGTGAATTTAGCACAGCGTCCAGCTGGAGGTCCAGTAAGATCTACTGTAGGAGAAACTCCGAGATATGCTGCTGCACTGAACAGAGAGGCGCACTGAACTTGCTTGATTTAAATGTGtac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1089 False 2461 TUCP 0.35 3 2550216 2554687
TU1090 True 3670 lncRNA 0.39 2 2550993 2554687
TU1091 False 492 lncRNA 0.47 2 2550993 2600511

Neighbor

gene id symbol gene type direction distance location
LOC111193163 NA coding downstream 7875 2539816 ~ 2542341 (-)
LOC103037050 LOC108432507 coding downstream 127575 2405363 ~ 2422641 (-)
LOC103036044 LOC108432506 coding downstream 154851 2376247 ~ 2395365 (-)
LOC103037376 NA coding downstream 177261 2324606 ~ 2372955 (-)
LOC103036651 LOC103036651,LOC108432502,LOC105899541,LOC105028795,LOC108278136,LOC107718120 coding downstream 438057 2103470 ~ 2112159 (-)
LOC103035527 prrx1,prrx1a,LOC108444493,LOC107693734,LOC107722649 coding upstream 99847 2700358 ~ 2718035 (-)
fam129a NA coding upstream 234801 2835312 ~ 2892356 (-)
LOC103032964 LOC108444491,LOC107722586,LOC107718136,LOC107693739,LOC107589867 coding upstream 316278 2916789 ~ 2928066 (-)
LOC103034573 pla2g4a,LOC107718137,LOC107677770,LOC107693742,LOC107722605,LOC107589895,LOC107594671 coding upstream 385822 2986333 ~ 3036834 (-)
c1h1orf27 cunh1orf27,LOC103031066 coding upstream 499335 3099846 ~ 3114769 (-)
G806 LOC108432510 non-coding downstream 24020 2523317 ~ 2526196 (-)
G782 LOC108432509 non-coding downstream 56373 2491615 ~ 2493843 (-)
G780 NA non-coding downstream 63051 2481385 ~ 2487165 (-)
G748 NA non-coding downstream 146899 2400655 ~ 2403317 (-)
G750 NA non-coding downstream 149790 2398073 ~ 2400426 (-)
G822 NA non-coding upstream 6594 2607105 ~ 2607722 (-)
G824 NA non-coding upstream 12830 2613341 ~ 2613813 (-)
G825 NA non-coding upstream 15572 2616083 ~ 2649987 (-)
G838 NA non-coding upstream 44751 2645262 ~ 2649013 (-)
G850 NA non-coding upstream 147537 2748048 ~ 2748280 (-)
znf414 NA other downstream 115815 2423713 ~ 2434401 (-)
gtf2b tf2b,gtf2b,LOC107585659,LOC107693714,LOC107718116,LOC107691461 other downstream 621961 1920480 ~ 1928255 (-)
yipf1 yipf1 other downstream 677089 1864515 ~ 1873127 (-)
LOC111197534 NA other downstream 1694056 855579 ~ 856160 (-)
LOC103037308 LOC108440474,LOC108278112,LOC107585786,LOC107669856,LOC107745208 other downstream 1879501 589669 ~ 670715 (-)
LOC103032016 arpc5b,arpc5,LOC103032016,LOC108431159,LOC104921830,LOC107698380,LOC107599090,LOC103045524 other upstream 310243 2910754 ~ 2970340 (-)
LOC103029371 agl,LOC108441576,LOC107722579 other upstream 793693 3394204 ~ 3445386 (-)
wdfy1 wdfy1,LOC106613124,LOC102785143,LOC103370589 other upstream 1281859 3882370 ~ 3909671 (-)
G1308 NA other upstream 1499254 4099765 ~ 4101566 (-)
LOC111193794 LOC108442858 other upstream 1666490 4267001 ~ 4271970 (-)

Expression


Co-expression Network