G125


Basic Information

Item Value
gene id G125
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 124561 ~ 127246 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU162
GTATGGGCTCTTTAATGTTGGAGTGAAAAGCTGTACTGTGGTTTTCAGTGCTCAGTCTTGGCTGTTACATGTGAAGGGAAATGCTGTATACAAAAATCCCCCTATTTTATAataggaataataataaaaataataataattagctacTAGTCTTGAATTACAGTCTATATTTATAAAGTCTAGTTCAGTGTCAGTAAACGTTTGTGTGTCAATTCTAGAGAGCAGTGTTGTGTAAAGAACTACAGAACCGGTTCAGAAACTATAGTCCTGCATCTACATTTCCCCTGAATGTCTCTGGGACCTCTGAAGCTTGAACTGCAAGCAGAATAAGGATTTAAAAGAACCTAAAAATAACCATTGTTCAATATGGTTGCTACCTTAAAGAAGAAGCAGTCTCCACCACTCCTGAGATGGTAGTTCAGAAGATCCAGTGACATACATAGGATTAACATTTGGTGTTTAAAaaatttaccaccctgttaccaGCATTAATTTTACCCCACATAGGAAAAACAGACCCAGGTTCTTCTGGACTGTAGAATGACGGCGTGTCCTCAGGTTTTTACAGTGAGTATATTTGGACTGTTGTTTCACAGTGAGGGTTCTAAGCAGGAGGTTCTCTAGTGAGGATGCATAGTTGTTTCTAAAACAGgtagaaaaatactgtaaatgatcACACattggaaaaggaaaaaaaaaaagaatacactgACTTCATTCACACTTTGGTTGGAGAACCGGCTGTGTTTCCATGCTCTAAAGTTGTGGTCACCAACCCTGTTCCTGGAGAACCCACTGCTCTGCATATTCGCCAAACACCTTAACACTGGCCAGGTTGGTTAACCCTTTAACTCCCAGTGAACATTTTAGTTCATGTATCTTCTTACCAGTTGCTTAAAGTGCTAAGATAGTAATGAACCCAACCTCTTTGAGGGGTGGTAGGGGTATGTTAGGTTAATGAAGGGTGCCCTCCACTAGAGGTTGCTGTGTCTTTCAGTAGtatgctttttcattttttacaagtTGCATCAATCTACAAGGCCAGAGAACCAGCTGCAATTCTAGGCCAAAGGTTTCAGACCAGCaaatttttaaagaattattgtaGTTTTAGCCTTAAAGCCTGGAGGATAAAGGGAATGCTGTCGTTCTAGGTTGACAATCTGTGTTGGTTTATTCaaaatttaaattcattttaatatatggTTGCCTGATTAAAATACTCTCTTATAGAAAATTACTATTGTTTAAGTGTTAATCAAGTGTTAATCAAAAGTCTTAACTaccttattttcttatttttaccaaatattgagAGTAGGCAGGTAATGAAATgttaagcatttttttctgggaaatgctaactagctaatttagCAGGCTTTAGTAACAATAGGcatgtttaaattatatttgtcACCAAGATTAGCTCCTTTAAAGCTGGTGTAGAGCTGCGGCTGGCTCTCTTGCTCTGAGGATGAAATATATTATTccatatatattattaactttagcaTATTATAGTTTCAGaggatttaataaattaaatgaaattatgtAACTTCTTACAGcacgaaaaagaaaaaaaaaatttattgtcttaaacaaaacaatacaaaaataatccctagcttttttttttcttactgagtatgttaaagggttaatgcCTGGAATAAGCAGGGTCAGGGTTCTCCAGGGTCAGGGTTGGGAAGCTGGTACAGAGACTAACTAACGGTGGCACGTGTTCAGATTTTTTCACTTCAGGAAGGAGTCGAGCTTTCTCTCGATGTTTGTGAAAGCGTCCATGCCCATGTAATCCGCCTGGCCCTGCTCCCAGTTATTCTTCCGCTCCTGAGAGGAGACCTGAGGAggtgctggaggaggaggagcccaGTTCATCTGAGGAGTCTTGTCATGGAATCCCACCTCCTCCACTCCGGTGTAGAAGGGCTGGGATCCGAACTCCTCCTTCATCAGAGGAACGATTGCGGAGGAGAACAGGCTCCACCACTGCAGCAGGTAGTTGGGCTGCAGGTCCGGATCCACCGCCTGACCCTTTAGCGTCCGGCTGCTGGAGTCGTACACATAGTCCCACGGCTTCACCTTCCCAAGGAAGTGCACCACTTTAGCATTGTGCCCGTACCTGCAGAAAAGGAACATAATC

Function

GO: NA

KEGG:

id description
ko04742 Taste transduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU162 True 2167 lncRNA 0.30 2 124561 127246

Neighbor

gene id symbol gene type direction distance location
bloc1s3 NA coding downstream 89351 32409 ~ 35210 (-)
LOC103023905 NA coding downstream 96879 18991 ~ 27682 (-)
hltf NA coding upstream 3645 130891 ~ 151164 (-)
LOC103028749 slc35g2a,LOC108414513,LOC107709891,LOC107586575,LOC107550608,LOC107680231 coding upstream 25626 152872 ~ 157606 (-)
pccb pccb,LOC107688488,LOC107722577,LOC107680238,LOC107709888 coding upstream 40060 167306 ~ 174827 (-)
LOC103029691 LOC108443634 coding upstream 57962 185208 ~ 191384 (-)
LOC111195070 LOC108442280 coding upstream 168012 295258 ~ 303748 (-)
G130 NA non-coding upstream 37409 164655 ~ 165044 (-)
G135 NA non-coding upstream 52151 179397 ~ 181446 (-)
G146 NA non-coding upstream 160830 288076 ~ 348916 (-)
G147 NA non-coding upstream 162417 289663 ~ 347236 (-)
G149 NA non-coding upstream 214272 341518 ~ 343597 (-)
LOC103037308 LOC108440474,LOC108278112,LOC107585786,LOC107669856,LOC107745208 other upstream 462423 589669 ~ 670715 (-)
LOC111197534 NA other upstream 728333 855579 ~ 856160 (-)
yipf1 yipf1 other upstream 1737269 1864515 ~ 1873127 (-)
gtf2b tf2b,gtf2b,LOC107585659,LOC107693714,LOC107718116,LOC107691461 other upstream 1793234 1920480 ~ 1928255 (-)
znf414 NA other upstream 2296467 2423713 ~ 2434401 (-)

Expression


Co-expression Network