G146


Basic Information

Item Value
gene id G146
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 288076 ~ 348916 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU190
agagagaaagagaaagagagagagagagagagagagagagagagagagagagagagtgaggaagctGTGGTTGGAGAGTGTGTTTGATGGGTGATCACGCTGTAAGATCAGAAATCATCAGTTTGTCCATTTTATTTCCGATCTCTGACGGAACCGAGATTTCCTCCGTCTCGTAATCTTCCTCAAACGAcctgaaacagaaaacacactcgTTACACTCCTAATACACACTTATTACACTCCtgatacacactttacactcctgatacacacattttacactcCACATATAGATTACGCTTCtaatacacactttacactatatatata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU190 True 330 lncRNA 0.32 3 288076 348916

Neighbor

gene id symbol gene type direction distance location
LOC103029691 LOC108443634 coding downstream 96692 185208 ~ 191384 (-)
pccb pccb,LOC107688488,LOC107722577,LOC107680238,LOC107709888 coding downstream 113249 167306 ~ 174827 (-)
LOC103028749 slc35g2a,LOC108414513,LOC107709891,LOC107586575,LOC107550608,LOC107680231 coding downstream 130470 152872 ~ 157606 (-)
hltf NA coding downstream 136912 130891 ~ 151164 (-)
bloc1s3 NA coding downstream 252866 32409 ~ 35210 (-)
LOC103031067 NA coding upstream 99662 448578 ~ 463834 (-)
pxylp1 pxylp1 coding upstream 155354 504270 ~ 525507 (-)
LOC103025162 NA coding upstream 359428 708344 ~ 713981 (-)
LOC103043916 NA coding upstream 515882 864798 ~ 871979 (-)
LOC103021504 LOC103021504,LOC108442331 coding upstream 789329 1138245 ~ 1146382 (-)
G135 NA non-coding downstream 106630 179397 ~ 181446 (-)
G130 NA non-coding downstream 123032 164655 ~ 165044 (-)
G125 NA non-coding downstream 160830 124561 ~ 127246 (-)
G170 NA non-coding upstream 96539 445455 ~ 462355 (-)
G178 LOC108440468,LOC108278266 non-coding upstream 207249 556165 ~ 578551 (-)
G301 LOC108442328 non-coding upstream 496626 845542 ~ 851944 (-)
G303 NA non-coding upstream 506154 855070 ~ 855489 (-)
G315 NA non-coding upstream 555696 904612 ~ 905544 (-)
LOC103037308 LOC108440474,LOC108278112,LOC107585786,LOC107669856,LOC107745208 other upstream 240753 589669 ~ 670715 (-)
LOC111197534 NA other upstream 506663 855579 ~ 856160 (-)
yipf1 yipf1 other upstream 1515599 1864515 ~ 1873127 (-)
gtf2b tf2b,gtf2b,LOC107585659,LOC107693714,LOC107718116,LOC107691461 other upstream 1571564 1920480 ~ 1928255 (-)
znf414 NA other upstream 2074797 2423713 ~ 2434401 (-)

Expression


Co-expression Network