LOC103031067


Basic Information

Item Value
gene id LOC103031067
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 448578 ~ 463834 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022661977.1
agagagagagatgtgtggaGGGTTAGAGAGAGATCAGTAGTCATAATTAATACTAAAAACAAGTTATAAACTCACAAAAAGCTGGAAATAGTAGGGTAATGGTAGTATACAGCGGCTGTATGGATGGTTTTCTGGATCTACGAATTGGTTAATAATTATGTCTAGACTGAAACAGAAGGGTGTTGGTTCCACCATGAGTAAACAAGAGCTACAGATCCACTGTTCTCTCAGCGGAATCAACGGTTTACAGACAATCAGGTCCAGTTCACCTGATCCCAGTGGAGTGTCTCTGAGAAGTGATAGATCCATGCAGAATCCAATCCAGTTAAAACCAGAGAAAAGGTCCAGTTCACCTGATCCCAGTGGAGTGTCTCTGAGAAGTGATAGATCCATGCAGAATCCAATCCAGTTAAAACCAGAGAAAAGGTCCAGTTCACCTGATCCCAGTGGAGTGTCTCTGAGAAGTGATAGATCCATGCAGAATCCAATCCAGTTAAAAACAGGGAAAAGGTCCAGTTCACCTGATCCCAGTGGAGTGTCTCTGAGAAGTGATAGATCCATGCAGAATCCAATCCAgttaaaaacagagaaaagGTCCAGTTCACCTGAGCCCAGTGGAGTGTCTCTGAGAAGTGATAGATCCATGCAGAATCCAATCCAGTTAAAAGATAAACCTTCAGTACCAGAGAGAAGTTTTCAGCTGAAAAGATCAAGTTCATCACCCCCAAGTGGGGTATCTCTGAAGAGTGATGAGTCCATGCAGACACCCATTCCATTAAATGGAAAACCTGTAAAACTTGTGGCACCACAAAAACATTTACAGCTGAGAAAATCTAATTCATCTGTGCCAAGAGTTGCGTCTCTGACGAGTTCAGAACATTTTCTCCCAGAAGAAAGatatGAGTCGGACACCTTGGGACTAACAAGCGAAAAATTGAAAAAGATTCTTGCTGAAAGGTGTCAGAGTTTATTTGAGGGAACAGCAGAGCAAGGAAACCCAGTACTTCTCAACGAGATCTTCACAGAACTGTACATAACAGAGTACATGAATGAATATCTCTTCATTTGTCATGAAGTAGAACAAATTGAGGCAAACCTGAAAATCGGAACAAATGACCATCAAATAAAATGCAACAATATCTTTAGACTCTTACCTGGACAAAATCAAGCTGTCAGGACAGTGCTGACTAAGGGAGTGGCTGGCATTGGCAAAACCGTCTCAGTGCAGAAGTTCATGCTGGATTGGGCTGAAGGAAAGGCCAATCAGGACATCCACTTTATTTTCCCACTTCCTTTCAGGGAGATTAATACAATGAGAGACCAAAAACACAGTCTAAATGACCTGCTTCAGCATTTTTTCATGGAAAGAATTGATGCAAGTTCAAACCAAATCGCCAACCGTTCCCTTGTTTTCATTTTGGATGGTCTGGATGAGTGTCGGCTTCCTTTGGACTTCCAGAACAATGAGAGTTTATCGGATCCTACAAAAGAAACTCAAGTAGATACACTTTTAACAAACCTAATCAAGGGAAATCTGCTTCCTTCTGCAAAAATCTGGATAACTTCTCGACCAGCTGCTTCTGGACTCATCCCTACTGACTATATCGATCGAATCACGGAGGTTCGAGGATTTGATGAACCACAGAAGGAAGAATATTTCAGGAAGAGGATCAGTGACCAAAGTCTGGCCAGTAGAATCGTTACCCACTTGAAGTCGTTGAGGAGCCtctacatcatgtgccacatacCAGTCTTCTGCTGGATGGCAGCCACTGTCCTTGAGAGAATGGTGGTCGACAGTGGGTGGGATAAGATCCCGAAGACTTTAACGCAGATGTACACATACTTCCTGATTACGCAGATTCACAGGAAAAAGGCAAAGTACTCTGAAAGCAAAGTCACAGATGAAGAGATGGTTGTCAAACTTGGGAAGTTGGCATTTGAGCAGCTCAATAAAGGCAACCTGATTTTCTATGAGGAAGATCTCAGAGAGTGTGGTATCGATGTCAAAGAGGCATCTGTGTACTCTGGAGTGTTCACACAGATCTTCAGGGAAGATTTTGGACTTTTCCAGAAGAAAGTATTCAGCTTTGTGCATATGAGCATTCAGGAACACCTTGCAGCGATGTATGTGTTCTTGTGCTTTCACAACCACAACCAAAATGTGCTCGATCCTCAAAAGACCAGTAAACATGAGAAACCTGTGACACTGCTTAACTTGCTGAAGACTGCAGTTGATAAAGCCTCAGAGAATACAAGTGGTCAACTGGACCTTTTCCTCCAGTTTCTCATAGGCTTCGCACTGGAGTCCAATCAGATCATCATACAAGACCTGCTGGTGCAGAGAAAAGCTAATCCCCAGGAAATAAAAGACACCATAGactatctgaaaataaaaatcagagaaacacatTGTGTTCGGTATTCAATCAAATACTTCCACTGTCTGAATGAACTCAATGAATCCTCTCTCGTGGATGAAATGAAAACCTTCTTGAAGAGCCAAACACGAAATGAGGACAATCTCTCTCCTGAACTCTGGTCAGCCTTAGCATTCATGTTAATGACGTCTGAAGAAAAGTCGGATGTGTTCGAGCTTAGAAATTATGGAAAGTCAGACATAGCTCTTATCTGCCTACTTCCAGTAATCAGTTTGTACAGGGAAGTCAGGCTGAATAACTGCATGATCACAGTGAAAGGTTGTGCATCATTTGCTACCATTTTATTCAAAATGACAGCcatgaaagagctggacctcagtcaCAACAATTTGCAAGATTCTGGAGTAAAGATGCTCTGTACTGGAATCCAAGCTGacactctggaaaaaatgaaGACAATTCGCACAACTGCAGAAAAACGTAATTTTCTTCCTTCAGTTCTGGCCTTAAATTCGTCCAATAACAGGGAGGAGAACCTGCAGTGGGACAGTGCATCAGAAAAAATCTACCATTTAATAGAGATATTTCCAATGAAAGAGTTCCCAGGACTACAGGGCACAGTGTGTAACATCAGGAGCCTAAGgCTGAATAAGTGTGGTGTGACCAGTGTGGGCTGTGGTTTTCTGGCACTGGTCCTGAAATCAAACTCCTCAAACATACAAGAACTCGAGCTAAGCCAGAACAGCATAGAAGACTCAGGAGTGAAAGTGCTTGCTGATGCTTTGAAGAAATCTTCATGTAAACTGGACACACTGAAGATCTCCAACTGCAACCTTAGATTGGAAGGTTTTGCAACACTAGCATCAGAAATCAGAGCAAATCCTTCTCAACTAAGAGTTTTGGACCTGAGCAGAAACAGACCAGGAGACCTGGGAGTTAAACTGCTCTTTGCTGCTCTGGAGGAAACACACTGTAGACTTGAGACAATAAAGTTAAGAGAGTGTGGCATCACAGAGAACAGCTGTGCAGCTCTGgcctcagctctcagctcaGAGGCTTCGTGTCTGAGAGAGCTGGATCTGAGTGGGAACAATTTCAAGGATTCAGGAGCGAAGCTGATTTCTGTTGGACTGGGGAGTCCACACTGTAGACTTCAACAACTCATGTTGTGCAGTTGCCATGTCGGGGAAGAAGGATACGCTGCCCTGACCGAAGCAATGAAATCGAATCCCTCTCTCCAGAAAGAGTGCAGACTAATTACTGATGAGCCTGGAGACTCCAGATTGCAGCAGTTGTGTGATATTGGATAGTAACTGGGTTGTTCTTTGCATAAAACAAAAGAGGACAGTTGCTGTAGGTCTCTAATGGCTAACAAGCCAATAAAACACAAGCAATTCTAAAATGTTTTGACCATGCTTCCATAGAATAGTTGCTTTATTCTGAATTTAGTGAATATTTCCATGTTGGAACCATGTGGTGATGCAACTGCATGCAGGCAAACCAATGCTAAACTCCATGCGATGCTATAATAAATGACAGCATTCTAATGTGGACCTTAACTTTTGCATAATTTCAGTACTGATAAGAAAGATGATGTCAAACTGTATGTGGGTGGAGTGGTCCAGTGGTTAACACACTGTCACTATGATCTGAGAATTGCTGTTCAAATCCCATTCCATGATGTTGGTGAAAACAGGCATTTGTTGGAAGATATATGAGAGCTGTGGATCCAGCACTTTCCTCTCAGTGTGTTGGCTGCCTACCATTCGCAGGAGatgaaaaagaggcggagtctttACAACTTCACCTGTATCAGAGAAGGCATGcactagtctttaccctcctaggGTTGGGCACAGTGCTATTGATAGGGAGATTGGCAACACCTTATATTTATATGGCCAATTCTAAAATGTTGTGTACTGTACTGGTATACTTTTCACATGCAGTATATATTCAATATTGCtttatagtgcattataatGCACATAATGCTTGTGTTACGAAGCCCCTATGTCCAGTAGGTACCCTCCATATGAAGTGGTACTAAACAATGTCTGTTAGAAATATGTctttaaagaaccttttaaaggtTCTTGTAAAGTTTCCAACAATCACCAACAAATCAACCAGCACCACTTGGTTCTtacaaaaatgttctttataaaaCCAAACATGATTCTTCTGTGGGTTCACTCACAGAAACATTTGaagtacttttatttatataaatgtagagTCAAAATGATGCACTTCTGTTTATATACCGTTATATATAGATGATTTACTTGTATAAATATAGCTTTtctgtaaaaaaggaaaagcagtctattttgtatgttttccaaACATGCTGCACTTCAGTTTCA
>XM_022666135.1
TCTAGATGTGTTTTATTAGATGTAATATTTCCGCAATAAATGTTTTGATCAGTTTTCAGCTGAAAAGATCAAGTTCATCACCCCCAAGTGGGGTATCTCTGAAGAGTGATGAGTCCATGCAGAATCCAATCCAGTTAAAACCAGAGAAAAGGTCCAGTTCACCTGATCCCAGTGGAGTGTCTCTGAGAAGTGATAGATCCATGCAGAATCCAATCCAgttaaaaacagagaaaagGTCCAGTTCACCTGAGCCCAGTGGAGTGTCTCTGAGAAGTGATAGATCCATGCAGAATCCAATCCAGTTAAAAGATAAACCTTCAGTACCAGAGAGAAGTTTTCAGCTGAAAAGATCAAGTTCATCACCCCCAAGTGGGGTATCTCTGAAGAGTGATGAGTCCATGCAGACACCCATTCCATTAAATGGAAAACCTGTAAAACTTGTGGCACCACAAAAACATTTACAGCTGAGAAAATCTAATTCATCTGTGCCAAGAGTTGCGTCTCTGACGAGTTCAGAACATTTTCTCCCAGAAGAAAGatatGAGTCGGACACCTTGGGACTAACAAGCGAAAAATTGAAAAAGATTCTTGCTGAAAGGTGTCAGAGTTTATTTGAGGGAACAGCAGAGCAAGGAAACCCAGTACTTCTCAACGAGATCTTCACAGAACTGTACATAACAGAGTACATGAATGAATATCTCTTCATTTGTCATGAAGTAGAACAAATTGAGGCAAACCTGAAAATCGGAACAAATGACCATCAAATAAAATGCAACAATATCTTTAGACTCTTACCTGGACAAAATCAAGCTGTCAGGACAGTGCTGACTAAGGGAGTGGCTGGCATTGGCAAAACCGTCTCAGTGCAGAAGTTCATGCTGGATTGGGCTGAAGGAAAGGCCAATCAGGACATCCACTTTATTTTCCCACTTCCTTTCAGGGAGATTAATACAATGAGAGACCAAAAACACAGTCTAAATGACCTGCTTCAGCATTTTTTCATGGAAAGAATTGATGCAAGTTCAAACCAAATCGCCAACCGTTCCCTTGTTTTCATTTTGGATGGTCTGGATGAGTGTCGGCTTCCTTTGGACTTCCAGAACAATGAGAGTTTATCGGATCCTACAAAAGAAACTCAAGTAGATACACTTTTAACAAACCTAATCAAGGGAAATCTGCTTCCTTCTGCAAAAATCTGGATAACTTCTCGACCAGCTGCTTCTGGACTCATCCCTACTGACTATATCGATCGAATCACGGAGGTTCGAGGATTTGATGAACCACAGAAGGAAGAATATTTCAGGAAGAGGATCAGTGACCAAAGTCTGGCCAGTAGAATCGTTACCCACTTGAAGTCGTTGAGGAGCCtctacatcatgtgccacatacCAGTCTTCTGCTGGATGGCAGCCACTGTCCTTGAGAGAATGGTGGTCGACAGTGGGTGGGATAAGATCCCGAAGACTTTAACGCAGATGTACACATACTTCCTGATTACGCAGATTCACAGGAAAAAGGCAAAGTACTCTGAAAGCAAAGTCACAGATGAAGAGATGGTTGTCAAACTTGGGAAGTTGGCATTTGAGCAGCTCAATAAAGGCAACCTGATTTTCTATGAGGAAGATCTCAGAGAGTGTGGTATCGATGTCAAAGAGGCATCTGTGTACTCTGGAGTGTTCACACAGATCTTCAGGGAAGATTTTGGACTTTTCCAGAAGAAAGTATTCAGCTTTGTGCATATGAGCATTCAGGAACACCTTGCAGCGATGTATGTGTTCTTGTGCTTTCACAACCACAACCAAAATGTGCTCGATCCTCAAAAGACCAGTAAACATGAGAAACCTGTGACACTGCTTAACTTGCTGAAGACTGCAGTTGATAAAGCCTCAGAGAATACAAGTGGTCAACTGGACCTTTTCCTCCAGTTTCTCATAGGCTTCGCACTGGAGTCCAATCAGATCATCATACAAGACCTGCTGGTGCAGAGAAAAGCTAATCCCCAGGAAATAAAAGACACCATAGactatctgaaaataaaaatcagagaaacacatTGTGTTCGGTATTCAATCAAATACTTCCACTGTCTGAATGAACTCAATGAATCCTCTCTCGTGGATGAAATGAAAACCTTCTTGAAGAGCCAAACACGAAATGAGGACAATCTCTCTCCTGAACTCTGGTCAGCCTTAGCATTCATGTTAATGACGTCTGAAGAAAAGTCGGATGTGTTCGAGCTTAGAAATTATGGAAAGTCAGACATAGCTCTTATCTGCCTACTTCCAGTAATCAGTTTGTACAGGGAAGTCAGGCTGAATAACTGCATGATCACAGTGAAAGGTTGTGCATCATTTGCTACCATTTTATTCAAAATGACAGCcatgaaagagctggacctcagtcaCAACAATTTGCAAGATTCTGGAGTAAAGATGCTCTGTACTGGAATCCAAGCTGacactctggaaaaaatgaaGACAATTCGCACAACTGCAGAAAAACGTAATTTTCTTCCTTCAGTTCTGGCCTTAAATTCGTCCAATAACAGGGAGGAGAACCTGCAGTGGGACAGTGCATCAGAAAAAATCTACCATTTAATAGAGATATTTCCAATGAAAGAGTTCCCAGGACTACAGGGCACAGTGTGTAACATCAGGAGCCTAAGgCTGAATAAGTGTGGTGTGACCAGTGTGGGCTGTGGTTTTCTGGCACTGGTCCTGAAATCAAACTCCTCAAACATACAAGAACTCGAGCTAAGCCAGAACAGCATAGAAGACTCAGGAGTGAAAGTGCTTGCTGATGCTTTGAAGAAATCTTCATGTAAACTGGACACACTGAAGATCTCCAACTGCAACCTTAGATTGGAAGGTTTTGCAACACTAGCATCAGAAATCAGAGCAAATCCTTCTCAACTAAGAGTTTTGGACCTGAGCAGAAACAGACCAGGAGACCTGGGAGTTAAACTGCTCTTTGCTGCTCTGGAGGAAACACACTGTAGACTTGAGACAATAAAGTTAAGAGAGTGTGGCATCACAGAGAACAGCTGTGCAGCTCTGgcctcagctctcagctcaGAGGCTTCGTGTCTGAGAGAGCTGGATCTGAGTGGGAACAATTTCAAGGATTCAGGAGCGAAGCTGATTTCTGTTGGACTGGGGAGTCCACACTGTAGACTTCAACAACTCATGTTGTGCAGTTGCCATGTCGGGGAAGAAGGATACGCTGCCCTGACCGAAGCAATGAAATCGAATCCCTCTCTCCAGAAAGAGTGCAGACTAATTACTGATGAGCCTGGAGACTCCAGATTGCAGCAGTTGTGTGATATTGGATAGTAACTGGGTTGTTCTTTGCATAAAACAAAAGAGGACAGTTGCTGTAGGTCTCTAATGGCTAACAAGCCAATAAAACACAAGCAATTCTAAAATGTTTTGACCATGCTTCCATAGAATAGTTGCTTTATTCTGAATTTAGTGAATATTTCCATGTTGGAACCATGTGGTGATGCAACTGCATGCAGGCAAACCAATGCTAAACTCCATGCGATGCTATAATAAATGACAGCATTCTAATGTGGACCTTAACTTTTGCATAATTTCAGTACTGATAAGAAAGATGATGTCAAACTGTATGTGGGTGGAGTGGTCCAGTGGTTAACACACTGTCACTATGATCTGAGAATTGCTGTTCAAATCCCATTCCATGATGTTGGTGAAAACAGGCATTTGTTGGAAGATATATGAGAGCTGTGGATCCAGCACTTTCCTCTCAGTGTGTTGGCTGCCTACCATTCGCAGGAGatgaaaaagaggcggagtctttACAACTTCACCTGTATCAGAGAAGGCATGcactagtctttaccctcctaggGTTGGGCACAGTGCTATTGATAGGGAGATTGGCAACACCTTATATTTATATGGCCAATTCTAAAATGTTGTGTACTGTACTGGTATACTTTTCACATGCAGTATATATTCAATATTGCtttatagtgcattataatGCACATAATGCTTGTGTTACGAAGCCCCTATGTCCAGTAGGTACCCTCCATATGAAGTGGTACTAAACAATGTCTGTTAGAAATATGTctttaaagaaccttttaaaggtTCTTGTAAAGTTTCCAACAATCACCAACAAATCAACCAGCACCACTTGGTTCTtacaaaaatgttctttataaaaCCAAACATGATTCTTCTGTGGGTTCACTCACAGAAACATTTGaagtacttttatttatataaatgtagagTCAAAATGATGCACTTCTGTTTATATACCGTTATATATAGATGATTTACTTGTATAAATATAGCTTTtctgtaaaaaaggaaaagcagtctattttgtatgttttccaaACATGCTGCACTTCAGTTTCA

Function

GO: NA

KEGG:

id description
ko04060 Cytokine-cytokine receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022661977.1 True 4750 mRNA 0.42 16 448578 463834
XM_022666135.1 False 4391 mRNA 0.41 12 448578 457659

Neighbor

gene id symbol gene type direction distance location
LOC111195070 LOC108442280 coding downstream 144830 295258 ~ 303748 (-)
LOC103029691 LOC108443634 coding downstream 257194 185208 ~ 191384 (-)
pccb pccb,LOC107688488,LOC107722577,LOC107680238,LOC107709888 coding downstream 273751 167306 ~ 174827 (-)
LOC103028749 slc35g2a,LOC108414513,LOC107709891,LOC107586575,LOC107550608,LOC107680231 coding downstream 290972 152872 ~ 157606 (-)
hltf NA coding downstream 297414 130891 ~ 151164 (-)
pxylp1 pxylp1 coding upstream 40436 504270 ~ 525507 (-)
LOC103025162 NA coding upstream 244510 708344 ~ 713981 (-)
LOC103043916 NA coding upstream 400964 864798 ~ 871979 (-)
LOC103021504 LOC103021504,LOC108442331 coding upstream 674411 1138245 ~ 1146382 (-)
LOC111192362 NA coding upstream 1029332 1493166 ~ 1496427 (-)
G151 NA non-coding downstream 83531 343925 ~ 365047 (-)
G146 NA non-coding downstream 99662 288076 ~ 348916 (-)
G147 NA non-coding downstream 101342 289663 ~ 347236 (-)
G149 NA non-coding downstream 104981 341518 ~ 343597 (-)
G135 NA non-coding downstream 267132 179397 ~ 181446 (-)
G178 LOC108440468,LOC108278266 non-coding upstream 92331 556165 ~ 578551 (-)
G301 LOC108442328 non-coding upstream 381708 845542 ~ 851944 (-)
G303 NA non-coding upstream 391236 855070 ~ 855489 (-)
G315 NA non-coding upstream 440778 904612 ~ 905544 (-)
G328 NA non-coding upstream 485999 949833 ~ 950520 (-)
LOC103037308 LOC108440474,LOC108278112,LOC107585786,LOC107669856,LOC107745208 other upstream 125835 589669 ~ 670715 (-)
LOC111197534 NA other upstream 391745 855579 ~ 856160 (-)
yipf1 yipf1 other upstream 1400681 1864515 ~ 1873127 (-)
gtf2b tf2b,gtf2b,LOC107585659,LOC107693714,LOC107718116,LOC107691461 other upstream 1456646 1920480 ~ 1928255 (-)
znf414 NA other upstream 1959879 2423713 ~ 2434401 (-)

Expression


Co-expression Network