blmh (blmh,LOC107743628)


Basic Information

Item Value
gene id blmh
gene name blmh,LOC107743628
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 14414254 ~ 14435382 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007236822.3
TTCTCGCGACATGGCAACAGTGCGATTTCCGGAATTCCGAGCGCGCGGCGCTACGCTGACTGGCTGCGAATGAAATAAACAGAAGACAAAAGAAGAAGCGAGACTGCGGGACTGATTCAGAGGCTGACACCGCCGAGCTCCAGCGCACAAACATGGAAACACCCGCCCCAGGTCTGAATCAGGAGAAGCTGTCTTCTTTTGTGAAGCGGCTGCGGTCCGAGCCTCGGTACATGCTTGCGCAGAATGTGTCCACCTGCATCGACCCCCTAGAAGTGTGCCTCCACAGGCAGACAGTCCAGGACACAGTGCATATCTTCCAGCACTCCATCCCCACGGAGGGTAAACCTGTCACCAACCAGAAGAACTCAGGGAGGTGTTGGATCTTCTCGTGCCTCAATGTCATGCGACTTCCTTTTATGAAGAAGTTTAACATTGAAGAGTTTGAGTTCAGTCAGTCCTATCTCTTTTTCTGGGATAAGGTGGAACGCTGCTATTACTTCTTACATGCCTGTGTGGAGACGGCCCAGAGGAAAGAGCCCGTTGATGGCCGGTTGGGCCAGTTTCTGCTCTCAAATCCCACCAATGATGGTGGACAGTGGGATATGCTGGTTAACCTCATTGAAAAATATGGCGTCATTCCAAAGAAGTGCTTTCCTGAATCTCACAGCTCTGAGGCCTCGCGTCGAATGAACGATATCCTCAATCACAAGCTGAGAGAGTATTGTTTAAGGCTGAGGAACATGGTGGCCAGTGACTCTACCAAGGCGGAGCTGAATGAAGCAATTGACACCATGATTGAGGAGGTCTTTCGAGTGGTCAGTGTGTGTCTGGGCAGTCCTCCAGATACTATCTGTTGGGAATACAGGGACAAGGACAAGAACTTCCACCGCATGGGTCCCTTGACCCCAAAGGAATTCTACACAAAGCACGTCAAGCCACTCTACAACCTGCAGGACAAGGTGTGCCTTGTGAATGACCCCCGGCCTCAGAACCCTTTCGGAAAGTTGTACAGTGTGGAGTTTTTGGGTAACATGGTAAGCGGCCGCAGCACACTCTACAATAATCAGCCCATCGAGCTACTGAAGACGGCCGCTGCAGAGTCCATCAAGGACGGAGAGGCTGTGTGGTTTGGCTGTGATGTAGGAAAGCATTTCCATGGCAAACTGGGTATCAATGACATGAACGTgtTTAACCATGAGCTGGTGTTTGGCATCTCTGTAAAGAACCTAACGAAGGCAGAGCGACTGATCTATGGAGACTCCATGATGACACATGCCATGATCCTTACTGCTGTTACTGACAAGGAGGGGAAGGAGGGATGCTATGAGAAGTGGAGAGTGGAGAACTCGTGGGGTGACGATCGTGGGAATAAAGGTTATCTGATCATGACGGACGAGTGGTTCTCTGAATATGTGTATGAGGTTGTGGTGGATAAAAAGTTCCTCTCCCCTGAAGTGCTGGAGGTTATGCAGCAGGAGCCTGTCGTTCTCCCAGCCTGGGACCCGATGGGAGCCCTGGCATAACCATGGAAACCAAGAGTGCCCTGCTCAATCCGGTCTCAGCCTGGTCTTTCTGAATCCCTTTGATTTTACCCTTCATAAACGCCCAAAAAAAGCCTGTTTTAGACAAAataaatttttttcttttttttactgga

Function

symbol description
blmh Predicted to enable cysteine-type peptidase activity. Predicted to be involved in homocysteine catabolic process and response to toxic substance. Predicted to act upstream of or within proteolysis. Predicted to be active in cytoplasm. Orthologous to human BLMH (bleomycin hydrolase).

NR:

description
PREDICTED: bleomycin hydrolase

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004197 cysteine-type endopeptidase activity molecular_function

KEGG:

id description
K01372 BLMH, pepC; bleomycin hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007236822.3 True 1657 mRNA 0.50 12 14414254 14435382

Neighbor

gene id symbol gene type direction distance location
LOC103037230 ssh2,LOC108440358 coding downstream 49785 14331805 ~ 14364469 (-)
git1 git1,LOC107685085,LOC107669736,LOC107548582,LOC105889552,LOC106580798 coding downstream 134964 14255315 ~ 14279290 (-)
LOC103035060 LOC108440363 coding downstream 245316 14138449 ~ 14168938 (-)
LOC103025751 LOC108427003,LOC107730853,LOC107582235,LOC107683286,LOC108277959 coding downstream 663975 13734473 ~ 13750279 (-)
LOC103043894 LOC108426997,LOC107589740 coding downstream 700879 13703983 ~ 13713375 (-)
LOC103039849 cd3eap coding upstream 82553 14517935 ~ 14520858 (-)
LOC103040167 gpr4,LOC108278409,LOC107743733,LOC107669721,LOC107548551 coding upstream 105025 14540407 ~ 14577509 (-)
LOC103040481 eml2,LOC108277999,LOC107685092,LOC107669753 coding upstream 157643 14593025 ~ 14630713 (-)
LOC103041915 NA coding upstream 276936 14712318 ~ 14720394 (-)
LOC111192841 NA coding upstream 318528 14753910 ~ 14755778 (-)
LOC107197060 NA non-coding downstream 43170 14369213 ~ 14371084 (-)
G3621 NA non-coding downstream 51182 14362000 ~ 14363072 (-)
LOC111190296 NA non-coding downstream 95357 14281032 ~ 14318897 (-)
G3610 NA non-coding downstream 166395 14247642 ~ 14247859 (-)
G3469 NA non-coding downstream 693229 13680519 ~ 13721025 (-)
LOC111190767 NA non-coding upstream 2289 14437671 ~ 14513968 (-)
G3631 NA non-coding upstream 38703 14474085 ~ 14475176 (-)
G3668 NA non-coding upstream 98361 14533743 ~ 14790620 (-)
G3697 NA non-coding upstream 301448 14736830 ~ 14737158 (-)
G3699 NA non-coding upstream 314736 14750118 ~ 14753636 (-)
G3612 NA other downstream 130029 14283623 ~ 14284225 (-)
LOC111189390 NA other downstream 281017 14124173 ~ 14133237 (-)
slc43a2 slc43a2,LOC107685082,LOC107548581,LOC107589710 other downstream 841882 13544500 ~ 13572372 (-)
LOC111197384 NA other downstream 1278613 13130212 ~ 13135641 (-)
sgcg sgcg other downstream 1633089 12759066 ~ 12781165 (-)
LOC103022652 LOC103022652,LOC108425821,LOC108277503 other upstream 1842623 16278005 ~ 16282632 (-)
ercc2 ercc2,LOC107743694,LOC107601732 other upstream 2209110 16644492 ~ 16653968 (-)
LOC103040336 mpzl2 other upstream 3548503 17983885 ~ 17998749 (-)
G4621 NA other upstream 3594980 18030362 ~ 18040766 (-)
LOC103031959 NA other upstream 3761198 18196580 ~ 18226004 (-)

Expression


Co-expression Network