LOC103041915


Basic Information

Item Value
gene id LOC103041915
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 14712318 ~ 14720394 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007236833.3
gtgtgtgtgtgtgtgagagagagagagagagagagagagagactaaaaccTACTCGGTTCTGCTCGCCTCTCAACGCAGCGTTAGTTCTCCTGTGTACAGGATGGAGTTTGTACTATCTGTGAACTTTTACATCGCTGTGCTCACTGCTGTTTTCTTCTTATTCTGGAAGAGTCGGAGAAAAGGATGTCAGAAGGCTTATGAGAGGCTGCCTCCAGGTCCCCCTCCTGCTCCAGTGGTGGGAAACTATTTTCAGCTGCGAGGAAAGGAGCCGTACAAGCATTACCTTCAGTTTAGTAAAAAGTATGGCCCTGTTTTCACCCTCTGGTTTGCTAACACTCCTGTTGTGGTGATCTCTGGATACCAAGCCTTAAAGGACTCCATGATTGGCATGGGTGAAGAGTTTAGCGGTCGGGCGAACTATCCCCTCTTACTGAAGGTCTCCAATGGATATGGTGTTTTGGTCAGCAATGGAGACAGGTGGAAGCAACTGCGGAGATTTTGTATCACGACTCTGAAGGACTTTGGCATGGGTCGACAAAGCATTgaggaaaaagtgagagaagagACCAGTTATCTGGTGCAAACCTTCAGCACTTTTGGAGACTCTGCATTTAATCCCAAAGACCTGATATCTGAGGCAGTGTGCAATGTGATCTGTTCAGTTATGCTCGGCCACAGATTTGAATCTGATGATCCTCTATTAAAACTTTTCATCACAGCTGTTAATAAATACTTCCATTTTCTGAATAGTCCTACTGGTCAGGCCTacaacattttcccaaaaattgttagcTTCTTTCCTGGAAAGATCCATGATGTGCTTTCAGCTGTGCAGGAGACAAAAGCTTCTTTAAAACGTGAGGTAGAGGCACGGTGGAAGACACTGGATCCTTCCGCACCACCACAGGACTTCATTGAAGCCTTCCTTTTACGAATGGAGGAGGAGAAACACAATCCCAATACAGAGTTTAATTATGAAAACCTGTTGTCCACGTCATGGAATCTGTTTAGTGCTGGCATGGAAACCACCTCCTCCACCCTCAGACAAGGCCTACTTTACATGATGAAACATCCAGATATCCAAGCAAAAGTCCAGAAGGAGATTGATGAGGTGTTGGGGCCACACCGGAGCCCCTCTATTGCTGACAGACAGAACATGCCATACACAGATGCAGTCGTTCATGAGATCCAGCGCAGCATGGATCTCACCCCTACCTCTGTTCCACATTACATGCTTAATGATACAGAGTTTAACAACTATTTAATTCCAAAGggaGCCATAGTTCTTCCTCTACTGTCCTCTGTGCTTTCTGACCCCAAACTTTGGAAGAACCCAGATTGTTTTGACCCAGAGAATTTCCTGGATGAAAATGGCCGATTTAAGAAGAATGATGGATTTGTTGCATTTGGAATGGGAAAGCGAGCCTGTTTGGGTGAGGCGATGGCCCGGGTGGAGCTCTTCATCTTCTTTACGTCTCTCCTCCAGCACTTCACCTTCAAGGCCACTGTCCTGCAGGAGGAGCTCGACACCACTCCTCTGATCTGCTGCTTTGGACGCATGCCGCGTTGTTTCGAATGCTATGCTGTTCGCAGGACGTAGACATCAGagataattatttaatgatacagtctttaaaaaatattttagtcattataAGAGAGAACAAACACCTCATGAATAGACTCTTTGTTAGGGATTTTTAGTTAGGTTTAAGATACAGGTAAATGTGACCCGGTGCTTGTAGAATGGGGTGATATATTTGCTGCACTGTAGACAGGCCTGTTGCAACAGAGCAAGCAAACCAGTCAATTGCTTAGAGCCTTGAGCTGGCCTGGGATCCCCAGACAATGACCAAGGATCTGGATTTATttgatcatcattatcatcttcaccaatgcaatatttttacattgtagatgcAAATTCTTACTGAACCATCAAATAATGAACACTTTGGCAACATTACTGTCAGACAAAGAGCCAGGGTGATGTGAAGCTTATTGTCAGCAgtggaaaataataaatgttttttttttaaatacatacctCTCTGCTTCCAGTAGATGGCGCCTGTTTCTCGGATATGGAGTGACCTtgaagaaaaatgtaataaatacacTGACTAGGTGGTGGGACACACAAGATTACTCAATTGTAGATCAATAGTcgtagtggtgtgtgtgggtgtgtatagGGGGTaatattcttgtaatattaccttccagaagaagaaatgtattattaatgcaTGTTGTGTCACAGTGGAAGATTAAAGCTGGATCCTGGAGCGAGGGTTTATAATAGGGCCAAGCAGAACCGAATGTTGGATTCTTAAGACAATAAAATAAGTTGTATGGACTCCACCATCA

Function

GO:

id name namespace
GO:0005783 endoplasmic reticulum cellular_component
GO:0031090 organelle membrane cellular_component
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen molecular_function
GO:0004497 monooxygenase activity molecular_function
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007236833.3 True 2371 mRNA 0.44 9 14712318 14720394

Neighbor

gene id symbol gene type direction distance location
LOC103040481 eml2,LOC108277999,LOC107685092,LOC107669753 coding downstream 81605 14593025 ~ 14630713 (-)
LOC103040167 gpr4,LOC108278409,LOC107743733,LOC107669721,LOC107548551 coding downstream 134809 14540407 ~ 14577509 (-)
LOC103039849 cd3eap coding downstream 191460 14517935 ~ 14520858 (-)
blmh blmh,LOC107743628 coding downstream 276936 14414254 ~ 14435382 (-)
LOC103037230 ssh2,LOC108440358 coding downstream 347849 14331805 ~ 14364469 (-)
LOC111192841 NA coding upstream 33516 14753910 ~ 14755778 (-)
LOC103043873 tmem87a,LOC108425916 coding upstream 102132 14822526 ~ 14837246 (-)
LOC103045693 LOC108425804,LOC107683437,LOC107588342,LOC107757408,LOC107672102,LOC105010786 coding upstream 160304 14880698 ~ 14884064 (-)
LOC103023234 omg coding upstream 395231 15115625 ~ 15120654 (-)
evi2b NA coding upstream 406354 15126748 ~ 15131139 (-)
LOC111190767 NA non-coding downstream 198350 14437671 ~ 14513968 (-)
G3631 NA non-coding downstream 237142 14474085 ~ 14475176 (-)
LOC107197060 NA non-coding downstream 341234 14369213 ~ 14371084 (-)
G3621 NA non-coding downstream 349246 14362000 ~ 14363072 (-)
LOC111190296 NA non-coding downstream 393421 14281032 ~ 14318897 (-)
G3697 NA non-coding upstream 16436 14736830 ~ 14737158 (-)
G3699 NA non-coding upstream 29724 14750118 ~ 14753636 (-)
G3717 NA non-coding upstream 94026 14814420 ~ 14814633 (-)
G3745 LOC108425806,LOC107700232,LOC107548486,LOC107655908 non-coding upstream 119885 14840279 ~ 14845627 (-)
G3756 vezf1b,LOC108425912,LOC108278304,LOC108435808 non-coding upstream 180154 14900548 ~ 14982513 (-)
slc6a4 slc6a4,slc6a4a,LOC107743629,LOC107669739,LOC107548586,LOC107756784,LOC107589714,LOC107685089 other downstream 240566 14380755 ~ 14471752 (-)
G3612 NA other downstream 428093 14283623 ~ 14284225 (-)
LOC111189390 NA other downstream 579081 14124173 ~ 14133237 (-)
slc43a2 slc43a2,LOC107685082,LOC107548581,LOC107589710 other downstream 1139946 13544500 ~ 13572372 (-)
LOC111197384 NA other downstream 1576677 13130212 ~ 13135641 (-)
LOC103022652 LOC103022652,LOC108425821,LOC108277503 other upstream 1557611 16278005 ~ 16282632 (-)
ercc2 ercc2,LOC107743694,LOC107601732 other upstream 1924098 16644492 ~ 16653968 (-)
LOC103040336 mpzl2 other upstream 3263491 17983885 ~ 17998749 (-)
G4621 NA other upstream 3309968 18030362 ~ 18040766 (-)
LOC103031959 NA other upstream 3476186 18196580 ~ 18226004 (-)

Expression


Co-expression Network