LOC103045693 (LOC108425804,LOC107683437,LOC107588342,LOC107757408,LOC107672102,LOC105010786)


Basic Information

Item Value
gene id LOC103045693
gene name LOC108425804,LOC107683437,LOC107588342,LOC107757408,LOC107672102,LOC105010786
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 14880698 ~ 14884064 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007236847.2
tcattgtttccGTATTCCAGCAGGTTCTTGTTTAACTGTTCATGGACATTCAGAGAAGTTGCCTCCCATTGTACTTTCAAATCTTTGTTATGCTGTACATTGAGAGTCTTTGTTTGAATACAGTACAATGAGGGTTTCGGATGGAAGGCATGAATACAGCGGGTCAGCCCATTATCCCAGAGCTCGCTCAGTGGAGTTCATTCCCTGCAACAACAGGCTTCTCTTCCAATGTAGAAATGTGTATGGCACAGTTGTGCATTTGGTCAGATTTGGATcaaatacagacaaaatacCTGAAGTGGTCTTTTGGTCTCCACAGCTTGAGAAATGGCAGACTGGTCAATTTTGGGTCGCTTCCTAGCAGAGGTTCAAAACCACTCTACAGTAATTGGCAAGATTTGGCTGACAGTGCTGCTAATCTTCCGAATTCTGCTGGTGACTCTGGTGGGAGATGCTGTGTATAGTGACGAGCAGTCCAAGTTCACCTGTAATACTCTTCAGCCTGGCTGCAACAACGTCTGCTACGACACCTTTGCTCCTGTGTCCCACCTGCGCTTCTGGGTCTTCCAGATAGTCCTGGTCTCTACTCCGTCCATCTTCTACATTGTCTACGTTCTGCACAAAATCACCAAAGATGATAAGCTTGAGAAAGAAAAGGCCCAGACTGAGGTCAAGCATCCACAGGGGGAGTATATCAGGCAGCTGGGGAGAGAAGGTAACGTTTATGATGGAGGGAAACCTTCCTATGGGCCGCAGGGTGGGGAGTGGGGAGGCCATGAGGAGGAGTCTATAGAGCAGAGCCTTCTGCAGGATGATTACAGGGAGGAGAAGGACCCAACTGAACTTTCCAGCCAGGTTCTGCTCATATACATCCTCCATGTGGTTCTTCGATCCATCCTCGAGATAACGTTCCTGGTAGGTCAGTACTACATGTTTGGCTTCGAGGTGCCACACCTGTATCGCTGTGAAACCTACCCCTGCCCGACACGGACTGACTGCTTTGTCTCGCGAGCTACTGAAAAGACCATCTTCCTGAACTTTATGTTCAGCATTAGCCTGGGCTGTTTCCTCCTCAACGTTGCAGAGCTCCACTACCTGGGCTGGGTCTACATATTCCGCATGCTGTGCACGGCGTGCTTCCTGTGCTGCAGGCCAGAAGCAGAGCTGTATTCTCCCCATAATCCTCTGCTGCTAAGGCTTAGGCACTCCATGAGAGGCAGGTTGGTCCTTCAGCCCCACACAGCCACCCTGTCCCACGAGAAGACGTCCAGTGCCCTGCTGTCCCACACACCAGCCATTTCTTTCGAGACAGACTCCACGGTAGAGTGCACCTCCAAGAGGAATCCAGAGGAAAAAGAGCGAATGAGACTAAAGCTGGCAAATATGGCTAGGCTGAGCAGCAAGAAGTCTTGGCTTTGAGTCAATTTACTGCAACTTCATGACTATTAATTTGGCACTCTTTGTATAAGAGGTACAGTAACATGTGCATAGTACTAGTacaaacactgacatgccaaacgtcaagggatagcagtatgtaataTACATCATGAGGTATgagatcatgaagtgttacctcaagaGAAAGCTTGCTTTTGCCCACATCTGAATctgaagttgtgaggtgttatcatgtGAGTAGGACATTCAACACTGACCAgcttgctcatggcaaggtgacctGAATTATTAGGGATCAAGCGATGTCTAAAAGTGCATGTTAAATGGATGGggtattccatttctgaagctattctggtatttaacattcctcgatccacagtgtcacttGTGTACTAAAAATGCCATagaaagcattaccacccacagtgaacagtgcagtgggtggtaatgatcgtgatgATTGTGACGCATCTGGCTCGTATTGTCCATGCATACAGGCGAGGGATTCTGGTGCAAATCACTTTCACATTCattgcaggagaccccacacacacgTATCTCGCAGGTCAatacagcattctttagcttacATGGAATGTCGCAAAAGTCATGGTATAAGATAATAGTTTCGGTCCAATGAAttgtggcatgtcagtgaagTACGCTGACTATGAAGTTTAGAAGTTTAAAACCCATAAagaaaccaaaaaatatatttttgtttagatttCTATGATTCAGGAAGTTGAGGGTTGGCAACTCTACAGTCATCCTTACTGCTCTTTGTTATActtaatgatttataatttcAAAATCTTTCTAAAATGCTCAATGTGATGCCTGTGTCTTATTGCTTCTCAAATGTCTAGCACTGAAGAATGATATGTAGGTTTCTGTTGTACTAGTATACAATATACTTCAGTTCTACAGTGATTTCACATTGCAGaactgtaatacatttttaaaaatctgaaactGCATTTACTTTCAAAGTATTTTGTAATAAGAATGAAagatttaaagttaaattaCAACAGAATAAAAAGGAACTTTGCTGCACTAGAATGCTGATGTCTTTTGAACTGATGTCTATTAAGTTTTCACATAATTTGATTTGAGTGCATGTGTCTGTTTACTCTTTTGTGTATATGGTAGTTTGTACTTTGTCCAGGGGAGGGCAGTATT

Function

NR:

description
PREDICTED: gap junction delta-2 protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007236847.2 True 2589 mRNA 0.44 2 14880698 14884064

Neighbor

gene id symbol gene type direction distance location
LOC103043873 tmem87a,LOC108425916 coding downstream 43452 14822526 ~ 14837246 (-)
LOC111192841 NA coding downstream 124920 14753910 ~ 14755778 (-)
LOC103041915 NA coding downstream 160304 14712318 ~ 14720394 (-)
LOC103040481 eml2,LOC108277999,LOC107685092,LOC107669753 coding downstream 249985 14593025 ~ 14630713 (-)
LOC103040167 gpr4,LOC108278409,LOC107743733,LOC107669721,LOC107548551 coding downstream 303189 14540407 ~ 14577509 (-)
LOC103023234 omg coding upstream 231561 15115625 ~ 15120654 (-)
evi2b NA coding upstream 242684 15126748 ~ 15131139 (-)
LOC103024177 abcg4b,abcg4,LOC108439979,LOC107585553,LOC107683844,LOC104937503 coding upstream 787027 15671091 ~ 15694631 (-)
usf1 usf1,LOC107657261,LOC107601709 coding upstream 815940 15700004 ~ 15705950 (-)
LOC103025848 usp2a,LOC108425809,LOC105920897,LOC103474949,LOC102230709,LOC106956784 coding upstream 943917 15827981 ~ 15863038 (-)
G3745 LOC108425806,LOC107700232,LOC107548486,LOC107655908 non-coding downstream 35071 14840279 ~ 14845627 (-)
G3717 NA non-coding downstream 66065 14814420 ~ 14814633 (-)
G3668 NA non-coding downstream 90078 14533743 ~ 14790620 (-)
G3699 NA non-coding downstream 127062 14750118 ~ 14753636 (-)
G3697 NA non-coding downstream 143540 14736830 ~ 14737158 (-)
G3756 vezf1b,LOC108425912,LOC108278304,LOC108435808 non-coding upstream 16484 14900548 ~ 14982513 (-)
G3767 wsb1,LOC107746651,LOC107756317 non-coding upstream 35753 14919817 ~ 14945445 (-)
G3775 NA non-coding upstream 76452 14960516 ~ 14960939 (-)
G3785 NA non-coding upstream 132240 15016304 ~ 15018200 (-)
LOC111191520 NA non-coding upstream 149107 15033171 ~ 15034749 (-)
slc6a4 slc6a4,slc6a4a,LOC107743629,LOC107669739,LOC107548586,LOC107756784,LOC107589714,LOC107685089 other downstream 408946 14380755 ~ 14471752 (-)
G3612 NA other downstream 596473 14283623 ~ 14284225 (-)
LOC111189390 NA other downstream 747461 14124173 ~ 14133237 (-)
slc43a2 slc43a2,LOC107685082,LOC107548581,LOC107589710 other downstream 1308326 13544500 ~ 13572372 (-)
LOC111197384 NA other downstream 1745057 13130212 ~ 13135641 (-)
LOC103022652 LOC103022652,LOC108425821,LOC108277503 other upstream 1393941 16278005 ~ 16282632 (-)
ercc2 ercc2,LOC107743694,LOC107601732 other upstream 1760428 16644492 ~ 16653968 (-)
LOC103040336 mpzl2 other upstream 3099821 17983885 ~ 17998749 (-)
G4621 NA other upstream 3146298 18030362 ~ 18040766 (-)
LOC103031959 NA other upstream 3312516 18196580 ~ 18226004 (-)

Expression


Co-expression Network