G3775


Basic Information

Item Value
gene id G3775
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 14960516 ~ 14960939 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU5063
tccgctttcaagcgtccagagaagcctggaagagaagtttcaggcttccctgttctttataaaatccctgctgattcacagggactctgtcagcgaggagaaaggctgctgtgattgttggagtctctgggaaagcctttgtcacgcccacatgcgaccGGTTGGAGGGGGGTAGTGCGACCATGTGCGTTttcgcgtcggagcagtgtaaattcacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5063 True 218 lncRNA 0.53 2 14960516 14960939

Neighbor

gene id symbol gene type direction distance location
LOC103045693 LOC108425804,LOC107683437,LOC107588342,LOC107757408,LOC107672102,LOC105010786 coding downstream 76452 14880698 ~ 14884064 (-)
LOC103043873 tmem87a,LOC108425916 coding downstream 123270 14822526 ~ 14837246 (-)
LOC111192841 NA coding downstream 204738 14753910 ~ 14755778 (-)
LOC103041915 NA coding downstream 240122 14712318 ~ 14720394 (-)
LOC103040481 eml2,LOC108277999,LOC107685092,LOC107669753 coding downstream 329803 14593025 ~ 14630713 (-)
LOC103023234 omg coding upstream 154686 15115625 ~ 15120654 (-)
evi2b NA coding upstream 165809 15126748 ~ 15131139 (-)
LOC103024177 abcg4b,abcg4,LOC108439979,LOC107585553,LOC107683844,LOC104937503 coding upstream 710152 15671091 ~ 15694631 (-)
usf1 usf1,LOC107657261,LOC107601709 coding upstream 739065 15700004 ~ 15705950 (-)
LOC103025848 usp2a,LOC108425809,LOC105920897,LOC103474949,LOC102230709,LOC106956784 coding upstream 867042 15827981 ~ 15863038 (-)
G3767 wsb1,LOC107746651,LOC107756317 non-coding downstream 15071 14919817 ~ 14945445 (-)
G3745 LOC108425806,LOC107700232,LOC107548486,LOC107655908 non-coding downstream 114889 14840279 ~ 14845627 (-)
G3717 NA non-coding downstream 145883 14814420 ~ 14814633 (-)
G3668 NA non-coding downstream 169896 14533743 ~ 14790620 (-)
G3785 NA non-coding upstream 55365 15016304 ~ 15018200 (-)
LOC111191520 NA non-coding upstream 72232 15033171 ~ 15034749 (-)
trnae-uuc NA non-coding upstream 74076 15035015 ~ 15035086 (-)
G3947 NA non-coding upstream 108591 15069530 ~ 15069797 (-)
G3968 NA non-coding upstream 221463 15182402 ~ 15186394 (-)
slc6a4 slc6a4,slc6a4a,LOC107743629,LOC107669739,LOC107548586,LOC107756784,LOC107589714,LOC107685089 other downstream 488764 14380755 ~ 14471752 (-)
G3612 NA other downstream 676291 14283623 ~ 14284225 (-)
LOC111189390 NA other downstream 827279 14124173 ~ 14133237 (-)
slc43a2 slc43a2,LOC107685082,LOC107548581,LOC107589710 other downstream 1388144 13544500 ~ 13572372 (-)
LOC111197384 NA other downstream 1824875 13130212 ~ 13135641 (-)
LOC103022652 LOC103022652,LOC108425821,LOC108277503 other upstream 1317066 16278005 ~ 16282632 (-)
ercc2 ercc2,LOC107743694,LOC107601732 other upstream 1683553 16644492 ~ 16653968 (-)
LOC103040336 mpzl2 other upstream 3022946 17983885 ~ 17998749 (-)
G4621 NA other upstream 3069423 18030362 ~ 18040766 (-)
LOC103031959 NA other upstream 3235641 18196580 ~ 18226004 (-)

Expression


Co-expression Network