G98520


Basic Information

Item Value
gene id G98520
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 8724173 ~ 8724437 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU132830
TTGTGACAACGCTAATATAAACAACAAACATTCTGCTGTAGGCTAATGCCTAATGCATACTGTACATCCTTAGAATCTGTCCAGTGTACCGTTGCCAAATGACTCTTTCACTTCAGTTTACTGATCCATGTGCACCTAGACAGGAGGAGAAGAACTACATTCATCTAAAGAGTGTTTCTGAGCATACTAGTATATACCTCTGTTTCTTCTTCACTTTGGCGTCCTTGGACTTGTCGCTCAGGGTCTTAATTCTAAAAAGGTTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132830 True 265 lncRNA 0.40 1 8724173 8724437

Neighbor

gene id symbol gene type direction distance location
LOC103029934 LOC108443716,LOC106606150 coding downstream 2368 8712872 ~ 8721805 (-)
zhx2 zhx2 coding downstream 76591 8624302 ~ 8647582 (-)
nsmce2 nsmce2 coding downstream 117314 8603108 ~ 8606859 (-)
LOC103027825 NA coding downstream 211875 8509797 ~ 8512298 (-)
fam84b fam84b coding downstream 314924 8406971 ~ 8409249 (-)
glipr1 NA coding upstream 215690 8940127 ~ 8945629 (-)
LOC103035192 NA coding upstream 224312 8948749 ~ 8993021 (-)
LOC103022230 LOC107698273 coding upstream 416262 9140699 ~ 9160699 (-)
LOC103044428 NA coding upstream 783619 9508056 ~ 9524810 (-)
LOC103042898 gnb3a,gnb3,LOC103042898,LOC108432288,LOC107672997,LOC102782474,LOC107549492 coding upstream 998854 9723291 ~ 9743918 (-)
G98519 NA non-coding downstream 853 8723059 ~ 8723320 (-)
G98410 NA non-coding downstream 147693 8576274 ~ 8576480 (-)
G98408 NA non-coding downstream 175946 8547919 ~ 8548227 (-)
G98407 NA non-coding downstream 179824 8544133 ~ 8544349 (-)
G98391 NA non-coding downstream 218684 8503476 ~ 8505489 (-)
G98521 NA non-coding upstream 3664 8728101 ~ 8728414 (-)
G98522 NA non-coding upstream 7921 8732358 ~ 8732854 (-)
G98523 NA non-coding upstream 11381 8735818 ~ 8736175 (-)
G98524 NA non-coding upstream 12433 8736870 ~ 8737248 (-)
G98527 NA non-coding upstream 18746 8743183 ~ 8815148 (-)
prelid3a prelid3a,LOC107715058 other downstream 248261 8467176 ~ 8475912 (-)
LOC103044427 NA other downstream 916031 7781480 ~ 7808142 (-)
LOC103043934 LOC103043934,LOC108429921 other downstream 944889 7769129 ~ 7779284 (-)
LOC111193437 NA other downstream 1014668 7684766 ~ 7709505 (-)
LOC103044954 LOC103044954,LOC108429942,LOC100705775,LOC107699547,LOC107589412,LOC107582081,LOC103388254,LOC107599504,LOC103356523,LOC101077558 other downstream 1873335 6843486 ~ 6850838 (-)
G98533 osbpl8,LOC107656451,LOC107658748 other upstream 51361 8775798 ~ 8795749 (-)
LOC103034868 NA other upstream 177031 8901468 ~ 8914931 (-)
yeats4 yeats4,LOC107555875,LOC107590554,LOC106609801,LOC107717680 other upstream 437964 9162401 ~ 9179368 (-)
LOC103027931 zgc:92606,LOC108432344,LOC107549485,LOC107724707,LOC107672985,LOC107598403 other upstream 805199 9529636 ~ 9537670 (-)
LOC103043823 tpi1,tpi1b,LOC107700200 other upstream 835695 9560132 ~ 9578053 (-)

Expression


Co-expression Network