G98541


Basic Information

Item Value
gene id G98541
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 8815350 ~ 8816071 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU132861
ccttgataaaaaaatgaaaactggtCCCACAGAACACCCGAACACCACATAAGGGTTAAGGTAAACTCGTTCAATATAGGTTTTTTAGTATGTAGACTCATTAAGCGTTTGAGAAACTAACAGAGGGTGGATTTGTTTGAAAGTTTTGACACGTTTaagcagtgttctcaagtctcacgccacacatggtatttctcatgcttgccaatccatcagctgtatattataatgtactctcgttgaggcaatcagaatatagatcgctctgttgttaggcagacctagtcaaacagggtggagtttcagccactGTGTCAGGCGCAAAGAACTGTCCGATtcaaaagttctgaaacacGTCGGTGAACAACTGAAGGAGAACGACGGCAGTTTGTTGAGACAAACTCGTACAGAGTTGTAGTTTGTTTAAGAAACGTATTCACCGtgggttctttttttaaaggtaaacaAACGTGTTCAGAGTGGGTGTTTAAGGTGAATTCTTTCAGATGGGAAGTTGGTTATAGTAACAGGTGTATTTAGAGTGAAGGTTTGAGATAAAGGTCTGTGTGggattgctttttttaaacccGCTCCCGTGTTttgtctaataataataattctgcaGACAGcagttttttccttttcctcacAGACCATGAGGTGCCGCATGTTGCTGCCAGCTGTAAAACTAGAAGTGAACGGTTATAAATTAACAGGAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132861 True 722 lncRNA 0.40 1 8815350 8816071

Neighbor

gene id symbol gene type direction distance location
LOC103029934 LOC108443716,LOC106606150 coding downstream 93545 8712872 ~ 8721805 (-)
zhx2 zhx2 coding downstream 167768 8624302 ~ 8647582 (-)
nsmce2 nsmce2 coding downstream 208491 8603108 ~ 8606859 (-)
LOC103027825 NA coding downstream 303052 8509797 ~ 8512298 (-)
fam84b fam84b coding downstream 406101 8406971 ~ 8409249 (-)
glipr1 NA coding upstream 124056 8940127 ~ 8945629 (-)
LOC103035192 NA coding upstream 132678 8948749 ~ 8993021 (-)
LOC103022230 LOC107698273 coding upstream 324628 9140699 ~ 9160699 (-)
LOC103044428 NA coding upstream 691985 9508056 ~ 9524810 (-)
LOC103042898 gnb3a,gnb3,LOC103042898,LOC108432288,LOC107672997,LOC102782474,LOC107549492 coding upstream 907220 9723291 ~ 9743918 (-)
G98527 NA non-coding downstream 202 8743183 ~ 8815148 (-)
G98524 NA non-coding downstream 78102 8736870 ~ 8737248 (-)
G98523 NA non-coding downstream 79175 8735818 ~ 8736175 (-)
G98522 NA non-coding downstream 82496 8732358 ~ 8732854 (-)
G98521 NA non-coding downstream 86936 8728101 ~ 8728414 (-)
G98550 NA non-coding upstream 38293 8854364 ~ 8858617 (-)
G98555 NA non-coding upstream 53048 8869119 ~ 8874896 (-)
G98559 NA non-coding upstream 71225 8887296 ~ 8888504 (-)
G98562 NA non-coding upstream 80625 8896696 ~ 8897120 (-)
G98565 NA non-coding upstream 87528 8903599 ~ 8903802 (-)
G98533 osbpl8,LOC107656451,LOC107658748 other downstream 19601 8775798 ~ 8795749 (-)
prelid3a prelid3a,LOC107715058 other downstream 339438 8467176 ~ 8475912 (-)
LOC103044427 NA other downstream 1007208 7781480 ~ 7808142 (-)
LOC103043934 LOC103043934,LOC108429921 other downstream 1036066 7769129 ~ 7779284 (-)
LOC111193437 NA other downstream 1105845 7684766 ~ 7709505 (-)
LOC103034868 NA other upstream 85397 8901468 ~ 8914931 (-)
yeats4 yeats4,LOC107555875,LOC107590554,LOC106609801,LOC107717680 other upstream 346330 9162401 ~ 9179368 (-)
LOC103027931 zgc:92606,LOC108432344,LOC107549485,LOC107724707,LOC107672985,LOC107598403 other upstream 713565 9529636 ~ 9537670 (-)
LOC103043823 tpi1,tpi1b,LOC107700200 other upstream 744061 9560132 ~ 9578053 (-)
G98804 NA other upstream 983552 9799623 ~ 9800918 (-)

Expression


Co-expression Network