Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC111193398 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035907.1 |
| NCBI id | CM008310.1 |
| chromosome length | 11650534 |
| location | 5486294 ~ 5487313 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002650499.1 | True | 209 | lncRNA | 0.44 | 3 | 5486294 | 5487313 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103027644 | NA | coding | downstream | 9158 | 5471449 ~ 5477136 (-) |
| LOC111193428 | NA | coding | downstream | 24239 | 5458465 ~ 5462055 (-) |
| LOC111193427 | NA | coding | downstream | 36235 | 5443589 ~ 5450059 (-) |
| LOC103038292 | NA | coding | downstream | 44518 | 5435548 ~ 5441776 (-) |
| LOC103037217 | NA | coding | downstream | 68037 | 5411853 ~ 5418257 (-) |
| setdb1 | setdb1,LOC107723461,LOC107582057,LOC107671207 | coding | upstream | 15775 | 5503088 ~ 5524610 (-) |
| il6r | NA | coding | upstream | 247939 | 5735252 ~ 5751437 (-) |
| atp8b2 | atp8b2,LOC107677029,LOC107714674,LOC107667702 | coding | upstream | 270336 | 5757649 ~ 5808960 (-) |
| aqp10 | LOC108429989 | coding | upstream | 322642 | 5809955 ~ 5818034 (-) |
| LOC103043753 | NA | coding | upstream | 330723 | 5818036 ~ 5835721 (-) |
| G97694 | NA | non-coding | downstream | 51505 | 5434579 ~ 5434789 (-) |
| G97690 | NA | non-coding | downstream | 63800 | 5421794 ~ 5422494 (-) |
| LOC111193426 | NA | non-coding | downstream | 131705 | 5353653 ~ 5354589 (-) |
| G97396 | NA | non-coding | downstream | 363690 | 5121927 ~ 5122604 (-) |
| G97393 | NA | non-coding | downstream | 372636 | 5110394 ~ 5113658 (-) |
| LOC111193399 | NA | non-coding | upstream | 9790 | 5497103 ~ 5501363 (-) |
| G97734 | NA | non-coding | upstream | 186026 | 5673339 ~ 5673728 (-) |
| G97740 | NA | non-coding | upstream | 188332 | 5675645 ~ 5675981 (-) |
| LOC111193429 | NA | non-coding | upstream | 195500 | 5682813 ~ 5684212 (-) |
| G97745 | NA | non-coding | upstream | 202821 | 5690134 ~ 5690538 (-) |
| dek | dek | other | downstream | 1033292 | 4444229 ~ 4453002 (-) |
| LOC107197182 | NA | other | downstream | 1307868 | 4150003 ~ 4178426 (-) |
| mboat1 | mboat1 | other | downstream | 1587046 | 3878696 ~ 3899248 (-) |
| LOC103031019 | NA | other | downstream | 3671260 | 1811701 ~ 1815034 (-) |
| carmil1 | carmil1 | other | downstream | 3708194 | 1582007 ~ 1778100 (-) |
| LOC103028279 | NA | other | upstream | 53600 | 5540913 ~ 5573904 (-) |
| G97717 | NA | other | upstream | 91249 | 5578562 ~ 5586666 (-) |
| riiad1 | NA | other | upstream | 103669 | 5590982 ~ 5593496 (-) |
| LOC111193431 | si:ch211-105c13.3,LOC108441945,LOC107594941,LOC107673711,LOC107582067,LOC107677027,LOC107735771 | other | upstream | 472008 | 5959321 ~ 6012784 (-) |
| G97793 | LOC103046199 | other | upstream | 528530 | 6015843 ~ 6022883 (-) |
