G135957


Basic Information

Item Value
gene id G135957
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 29209488 ~ 29209834 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU183917
AGAGGGCAGTGAGGAGACAGTATTCATTAGCTCACtgacaaagacacacacacacacactcacaaacacacacaattacacacacaaacacccttCACACAGTTCACCTCACACACAGGGAACACACACTTCACTGCAGCTTCCCTCTGACAGGAGGAAGTGATGTCACACTCTGTCTTAGTCTGTCTTTTGTTTTGAAGGGGCAGGTCTAGGGCCAGGGGTCAGGGGTCAGGGTGAGGATTAGGGTCAAGGGTCAGTGTATGTGATGTGAATAGTATGTGGTGTTGGGGACGGGGGCAAATCTGTGTCCCCTAAATGTGTTTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU183917 True 325 lncRNA 0.49 2 29209488 29209834

Neighbor

gene id symbol gene type direction distance location
LOC111194137 LOC108410735 coding downstream 16801 29187419 ~ 29192687 (-)
LOC103041298 NA coding downstream 184054 29023423 ~ 29025434 (-)
LOC103040686 NA coding downstream 377307 28828439 ~ 28832181 (-)
LOC103038505 NA coding downstream 405588 28783783 ~ 28803900 (-)
LOC103033755 NA coding downstream 446566 28748440 ~ 28762922 (-)
LOC111194136 NA coding upstream 49769 29259603 ~ 29264231 (-)
LOC103039130 eno3,LOC108416151,LOC107737945,LOC107694617,LOC101175132 coding upstream 77994 29287828 ~ 29296749 (-)
LOC103039434 LOC103039434,LOC108275705,LOC107573937,LOC107737944,LOC107694639,LOC107566551 coding upstream 91204 29301038 ~ 29306702 (-)
rnf146 rnf146,rn146,LOC101067458,LOC106605535 coding upstream 236193 29446027 ~ 29451967 (-)
LOC103044459 NA coding upstream 448562 29658396 ~ 29671479 (-)
G135938 LOC103035469,LOC105891467,LOC108275695,LOC107566544,LOC107681651 non-coding downstream 64602 29131457 ~ 29144886 (-)
G135935 NA non-coding downstream 81182 29127892 ~ 29128306 (-)
G135902 NA non-coding downstream 151996 29053767 ~ 29057492 (-)
LOC111194134 NA non-coding downstream 167946 29038710 ~ 29041542 (-)
LOC111194133 NA non-coding downstream 171407 29001883 ~ 29038081 (-)
G135959 NA non-coding upstream 29696 29239530 ~ 29239731 (-)
G135970 NA non-coding upstream 115836 29325670 ~ 29341961 (-)
G135971 NA non-coding upstream 134118 29343952 ~ 29344243 (-)
G135972 NA non-coding upstream 150335 29360169 ~ 29415018 (-)
G135987 NA non-coding upstream 187563 29397397 ~ 29399730 (-)
G135910 NA other downstream 87817 29067891 ~ 29121671 (-)
LOC103037426 NA other downstream 394870 28809292 ~ 28814618 (-)
LOC103032909 pik3ca,zgc:158659,LOC107653898,LOC107571432,LOC105891463,LOC102200943 other downstream 469148 28708643 ~ 28740340 (-)
LOC111188233 NA other downstream 803029 28276067 ~ 28406459 (-)
LOC111194130 NA other downstream 1131566 28067510 ~ 28077922 (-)
LOC103034081 NA other upstream 32409 29242243 ~ 29247385 (-)
LOC103038817 LOC103038817 other upstream 64327 29274161 ~ 29280692 (-)
G136173 NA other upstream 838447 30048281 ~ 30055728 (-)
G136691 NA other upstream 3157359 32367193 ~ 32367462 (-)
G136773 NA other upstream 3573240 32783074 ~ 32784304 (-)

Expression


Co-expression Network