oard1 (oard1)


Basic Information

Item Value
gene id oard1
gene name oard1
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 24831372 ~ 24836141 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007249913.3
CTCCGCCAGGGGGCAGCGCTGCTCATCTGACAACACCAACACAAACATTCAGcggcagctgctgctgttaagGAGGCTTTCCACCTTCCTCGATTAGACGGAAAACTCTGGAAGAACAGCCACATGTACAGAGGTAGATATGTACCACAGAAATGAGAAAATGGCTAAAGAACCCAAGAGCCAGCCTGGTGTTGCACTTCATAAGAAtgaagacagagaatatAACATTCCATGTAGTGAGTGGCTGATGTCCTCCTCTCCTGGTCAGCACACAGCAGAGGGCAGTAAGCTGAAGTGTGTGAAGGGGGATCTGTTCTCCTGCCCTGCAACAGAAGCCCTCGCTCACTGTATCAGTGAAGACTGCCGCATGGGAGCAGGCATCGCGGTCCTCTTCAAAAAGAAGTTTGGTGGAGTGGATCAACTCCTAGCGCAGAAGAAGAAACCTGGGGAGTGTGCTGTACTTAAGCGATCGGGCCGATTTGTTTACTACCTGATCACAAAGAAAAGGTACAGCCATAAGCCCACCTATGAAACACTCAGACAAAGCCTGGAGGCCATGAAAACACACTGCTTAGAGAATGGAGTGACCAGGCTATCCATGCCTCGGATTGGCTGTGGACTGGATCGACTGAGATGGGACAGAGTGATTGTGATGATTGAAGAAGTCTTCCAGAACACAGATGTGACCATAACGGTATATTTACTGTAGCCAATATTTGTCTTCTGATCAGCAACAAAGAGCATTGAACAGAATTTAATAATTCAAAGTCTTTCTGACTTTAAACAAATATCTTTGGTATAAATGATCTAAGAGGTGTTCGGTTTCTAAATAGGAACAAGgtactgtttgtttttgtttgttttttgctaattctgAAAGCTGTTTTGAGGTGTAAAGATGATGAGGCATGTTGACCACTAGATGGTGTCAATGCTAAGGATTCCTGTTGTCTGCCTTAcagctgtttgtttattttcattccTTTAAGTGTTTGGTTTAATCAGCAATGTAAATAGAGAATAAATGAAAATCAATGTctgatttataaaataaatacttaattttcatTACCATA
>XM_007249914.3
TTAGATATCCCTCCGCCAGGGGGCAGCGCTGCTCATCTGACAACACCAACACAAACATTCAGcggcagctgctgctgttaagGAGGCTTTCCACCTTCCTCGATTAGACGGAAAACTCTGGAAGAACAGCCACATGTACAGAGGTAGATATGTACCACAGAAATGAGAAAATGGCTAAAGAACCCAAGAGCCAGCCTGGTGTTGCACTTCATAAGAAtgaagacagagaatatCACACAGCAGAGGGCAGTAAGCTGAAGTGTGTGAAGGGGGATCTGTTCTCCTGCCCTGCAACAGAAGCCCTCGCTCACTGTATCAGTGAAGACTGCCGCATGGGAGCAGGCATCGCGGTCCTCTTCAAAAAGAAGTTTGGTGGAGTGGATCAACTCCTAGCGCAGAAGAAGAAACCTGGGGAGTGTGCTGTACTTAAGCGATCGGGCCGATTTGTTTACTACCTGATCACAAAGAAAAGGTACAGCCATAAGCCCACCTATGAAACACTCAGACAAAGCCTGGAGGCCATGAAAACACACTGCTTAGAGAATGGAGTGACCAGGCTATCCATGCCTCGGATTGGCTGTGGACTGGATCGACTGAGATGGGACAGAGTGATTGTGATGATTGAAGAAGTCTTCCAGAACACAGATGTGACCATAACGGTATATTTACTGTAGCCAATATTTGTCTTCTGATCAGCAACAAAGAGCATTGAACAGAATTTAATAATTCAAAGTCTTTCTGACTTTAAACAAATATCTTTGGTATAAATGATCTAAGAGGTGTTCGGTTTCTAAATAGGAACAAGgtactgtttgtttttgtttgttttttgctaattctgAAAGCTGTTTTGAGGTGTAAAGATGATGAGGCATGTTGACCACTAGATGGTGTCAATGCTAAGGATTCCTGTTGTCTGCCTTAcagctgtttgtttattttcattccTTTAAGTGTTTGGTTTAATCAGCAATGTAAATAGAGAATAAATGAAAATCAATGTctgatttataaaataaatacttaattttcatTACCATA
>XM_007249917.3
CCTCCGCCAGGGGGCAGCGCTGCTCATCTGACAACACCAACACAAACATTCAGcggcagctgctgctgttaagGAGGCTTTCCACCTTCCTCGATTAGACGGAAAACTCTGGAAGAACAGCCACATGTACAGAGATGGCTAAAGAACCCAAGAGCCAGCCTGGTGTTGCACTTCATAAGAAtgaagacagagaatatCACACAGCAGAGGGCAGTAAGCTGAAGTGTGTGAAGGGGGATCTGTTCTCCTGCCCTGCAACAGAAGCCCTCGCTCACTGTATCAGTGAAGACTGCCGCATGGGAGCAGGCATCGCGGTCCTCTTCAAAAAGAAGTTTGGTGGAGTGGATCAACTCCTAGCGCAGAAGAAGAAACCTGGGGAGTGTGCTGTACTTAAGCGATCGGGCCGATTTGTTTACTACCTGATCACAAAGAAAAGGTACAGCCATAAGCCCACCTATGAAACACTCAGACAAAGCCTGGAGGCCATGAAAACACACTGCTTAGAGAATGGAGTGACCAGGCTATCCATGCCTCGGATTGGCTGTGGACTGGATCGACTGAGATGGGACAGAGTGATTGTGATGATTGAAGAAGTCTTCCAGAACACAGATGTGACCATAACGGTATATTTACTGTAGCCAATATTTGTCTTCTGATCAGCAACAAAGAGCATTGAACAGAATTTAATAATTCAAAGTCTTTCTGACTTTAAACAAATATCTTTGGTATAAATGATCTAAGAGGTGTTCGGTTTCTAAATAGGAACAAGgtactgtttgtttttgtttgttttttgctaattctgAAAGCTGTTTTGAGGTGTAAAGATGATGAGGCATGTTGACCACTAGATGGTGTCAATGCTAAGGATTCCTGTTGTCTGCCTTAcagctgtttgtttattttcattccTTTAAGTGTTTGGTTTAATCAGCAATGTAAATAGAGAATAAATGAAAATCAATGTctgatttataaaataaatacttaattttcatTACCATA

Function

symbol description
oard1 Predicted to be involved in peptidyl-glutamate ADP-deribosylation. Orthologous to human OARD1 (O-acyl-ADP-ribose deacylase 1).

NR:

description
O-acetyl-ADP-ribose deacetylase 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007249913.3 True 1076 mRNA 0.43 6 24831372 24836131
XM_007249914.3 False 1041 mRNA 0.42 6 24831372 24836141
XM_007249917.3 False 1005 mRNA 0.43 6 24831372 24836132

Neighbor

gene id symbol gene type direction distance location
trnaf-gaa_3 NA coding downstream 25729 24805571 ~ 24805643 (-)
pard6b pard6b,LOC108436329,LOC107560924,LOC107562464,LOC107712746,LOC107657018,LOC107737628 coding downstream 37092 24751907 ~ 24794280 (-)
arfgef2 arfgef2,LOC108436330,LOC107671990,LOC107737629,LOC107562465 coding downstream 83260 24705747 ~ 24748112 (-)
bcl2l1 bcl2l1 coding downstream 127420 24662615 ~ 24703952 (-)
fam110a fam110a coding downstream 226026 24571423 ~ 24605346 (-)
guca1b guca1b,LOC107562461,LOC107657012,LOC107560929 coding upstream 5711 24841852 ~ 24846483 (-)
klhdc8b klhdc8b,LOC107712738,LOC106572099 coding upstream 18060 24854201 ~ 25008250 (-)
LOC103032451 LOC108436322 coding upstream 187726 25023867 ~ 25043285 (-)
LOC103031928 asb14b,LOC108436293,LOC108276494,LOC107560887,LOC107671999,LOC107737718 coding upstream 208309 25044450 ~ 25053042 (-)
dnah12 dnah12 coding upstream 217958 25054099 ~ 25098182 (-)
G134520 NA non-coding downstream 1488 24829305 ~ 24829884 (-)
G134516 LOC103033727,LOC108436326,LOC108276432 non-coding downstream 10783 24817171 ~ 24820589 (-)
G134500 NA non-coding downstream 157583 24672405 ~ 24673789 (-)
G134497 NA non-coding downstream 174800 24654166 ~ 24656572 (-)
G134496 NA non-coding downstream 177281 24653384 ~ 24654091 (-)
G134535 NA non-coding upstream 186091 25022232 ~ 25022463 (-)
G134748 NA non-coding upstream 354823 25190964 ~ 25191789 (-)
LOC103026004 NA non-coding upstream 448302 25284443 ~ 25303167 (-)
G134775 NA non-coding upstream 593071 25429212 ~ 25429657 (-)
G134779 NA non-coding upstream 619410 25455551 ~ 25461401 (-)
trnah-gug_15 NA other downstream 20870 24810431 ~ 24810502 (-)
ebp ebp,LOC107672060,LOC107712744 other downstream 22037 24806913 ~ 24809335 (-)
LOC111194123 NA other downstream 199515 24621617 ~ 24631857 (-)
trpc4ap trpc4ap,trpc4apb,LOC107741324,LOC107737634,LOC107562468,LOC107672047,LOC107560917 other downstream 336947 24483965 ~ 24494425 (-)
LOC111194023 NA other downstream 397901 24431159 ~ 24433471 (-)
G134867 si:rp71-17i16.4,tnnc2,LOC103044939,LOC108434838,LOC107737591,LOC107568845,LOC107672054,LOC101472191 other upstream 955746 25791887 ~ 25798373 (-)
taf13 taf13,LOC107671955 other upstream 967936 25804077 ~ 25805824 (-)
LOC111194124 NA other upstream 1078260 25914401 ~ 25927945 (-)
G134931 uba1,LOC107737583,LOC107672015,LOC107699604 other upstream 1151050 25987191 ~ 26004934 (-)
G135102 emc1 other upstream 1744035 26580176 ~ 26581742 (-)

Expression


Co-expression Network