CI01000012_04647182_04692241 (KCNH5, KCNH5B)


Basic Information

Item Value
gene id CI01000012_04647182_04692241
gene name KCNH5, KCNH5B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 4647182 ~ 4692476 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_04647182_04692241.mRNA
TGGAGTTGCTGGGCACGCGCTCGACGTTGGAGTTGGAGATCCCCAGCTTCTGCCTGCGCGCTTTGGTGCAGCTGCGCATGCGCGGGGAGCTCCCCGTGCCCACCGACTTGTCGCTTTGAGCTCAGAGCGCGCGCGGGTGGCACACAGAAGCTCCCGGCCAGCCAGCGCGCGACGTTACCATGAGCCTCCCCGCTCCGCCGGCAGAGACTCCACGCGCAGAGAGTGCCCACCTGACGAGAGCAGCGCGAGAGCCACAGACGCACGATGCCCGGGGGAAAGAGAGGGCTGGTGGCACCGCAAAACACTTTCCTGGAGAATATCGTCAGACGCTCGAGTGACAAGTTTCTTGCTGGGGAACGCTCAGATTGTGGACTGGCCTGTAGTTTACAGTAATGACGGCTTCTGCAAGCTGTCTGGATACCACAGAGCAGAGGTCATGCAGAAAAGCAGCACATGCAGTTTTATGTATGGGGAGCTGACAGACAAGAAGACCATAGAAAAGGTGAGACAGGCCTTTGACAACTATGAGTCCAACTGCTTTGAAGTGCTGCTGTACAGAAAGAACAGAACTCCGGTGTGGTTCTACATGCAGATTGCACCAATCCGAAATGAAAATGACAAAGTGGTTCTGTTCCTGTGTACATTTAAGGACATCACTGTCTTCAAACAGCCTATTGAAGACGAAAGCACTAGAGGTTGGACCAAGTTTGCACGTTTGACTCGAGCATTGACGAACAGCAAAAGCACCATTCAGCAACTCACGCCCGTGAGCAGAACTGACGTCACTTCGCACAAACAGTCCAGACTCGCAGAGTGTTCGCAAGGCAGCATTACACTGGTTAAGGTGCTTCAACTGGGTTCTGACATCCTTCCGCAGTATAAGCAGGAAGCTCCTAAGACCCCGCCTCACATCATCTTACACTACTGCACCTTTAAGACCACCTGGGACTGGGTCATCCTCATCTTGACGTTCTACACTGCCATCATGGTTCCTTACAACGTCTCCTTCAAGACCAAACAGAACAACGTCACCTGGCTAGTTCTGGACAGTGTTGTAGATGTCATTTTCCTTGTGGACATCGTGCTCAACTTCCACACCACGTTTGTCGGGCCTGGAGGGGAGGTGATCTCGGATCCGAAGCTGATCAGGATGAATTACCTGAAGACCTGGTTTGTCATAGACCTGCTGTCCTGTCTGCCCTATGACATCATCAACGCTTTTGAAAACGTGGATGAGGTCGTTCGACTGCTTCGATTGGGTCGTGTTGCACGTAAACTGGACCACTATCTGGAGTACGGCGCAGCTGTGCTCGTATTACTGGTCTGTGTGTTTGGATTGGTGGCCCACTGGCTTGCCTGCATATGGTACAGCATTGGAGATTATGAGGTCATCGATGAACAAACCAACACCATCAAGACTGACAGCTGGCTCTACCAATTAGCCACCAGCATTGGATCCCCGTACCGGTACAATGCCAGTGGAACTGGCCAATGGGAGGGCGGTCCTGGGAAAGACTCTCTGTATATAACGTCACTATATTTCACCATGACCAGCCTGACCACCATTGGCTTTGGAAACATTGCGCCAACTACAGACGGAGAGAAGATCTTCTCTGTGGCCATGATGATGGTCGGATCTCTCCTTTACGCCACCATCTTCGGTAATGTGACAACCATTTTCCAGCAGATGTATGCAAACACCAACCGTTACCACGAAATGCTGAATAACGTGCGGGATTTCCTCAAGCTCTACCAGGTGCCCAAAGGCCTCAGTGAGAGAGTGATGGACTACATCGTCTCCACGTGGTCCATGTCCAAAGGCATCGACACAGAGAAGGTGCTCTCCATCTGCCCTAAAGACATGCGGGCGGATATCTGCGTGCACCTGAACAGGAAGGTGTTCAACGAGCACCCAGCGTTCCGATTGGCCAGTGACGGATGTTTGCGCTCATTGGCTGTGGAGTTCCAAATGATACACTCCGCCCCCGGTGACCTCATCTTCCATGCGGGTGAAAGCGTGGACCTGCTCTGCTTTGTGGTGTCAGGATCACTGGAGGTCATCCAGGATGACGAGCTCGGCAGGAGGCCTGGACGTACAGTGTCTCTGTGTGCCCAGGAGGGTGGTAAAGGGGACGTGTTTGGTGATGTGTTTTGGAAGGAGACGACTTTGGCCCATTCATGTGCTAATGTTCGAGCGTTAACATACTGTGATCTTCACATCATAAAGAGAGAAGCCCTGTTGAAGGTGTTGGACTTTTACACAGCGTTTGCCAACTCCTTTTCCCGAAACCTCATTCTCACCTGCAACCTACGCAAAAGGGCCTCAGGAGAGTACAGAGATACACAAATACAAGTTCAGGCACACTACATGATAAATATATGGAAAACGAAAAGAAAGAAGTTACAAAAAATAAAACAAGTGGATAACGATAAAATGCTTCCATTCGCTCACCTCGGGCAGATTTTCCCCAAGAGCTCTTACAGAGAAAAAAAGTCAGACCCATTTAGTCGTGGATACACACAGCGACACCTTGGCAAGATGTTTATATTCCGTAAAATAATCGATGTGAAGAAGGAGGAAGAGGAGAGGCAGCGCTCAAAGAATGAGGTCCCACTCTCCATTCCTGTGGACCACCCGGTCCGAAAACTTTTCCAGAAGTTTAAACAGCAGAAGGAGCTCCGTAACCAGGGTGCTTCGGCCCAGCTCGACCTGGAGAAGAATCAACAGCAGCCCACACGCATGCCAAAACCACACACCTCCCTCATGCAGAACTCGCTGCACACGGTTCAGAACGGGTCCACAAGCAGCGTGGTCACCATCTCCCAGATCACACCCATCCAGAACTGTCTGGCCTATCCTAAAGCGGGCGACTCCATCAAGCAGATCAACCGCGACATCATGGAACTCAAGCCTGCTGTGGCCAGCGGTGACCAAGTCGCAAACCGGCTCAAAGTGAATAACACGGCACGGACCAAACCCGCAGGAACCGGCCGTGGCTGGATGAGACTGAAAAACAACATGGCTGCCCCAGGTTCACCTCCAGAGGAGGAGAGGAAAGAGGGATTAAACAATGCAGCTAAGGCCGTGTCCATGGAGCGCCTTTCACCAGAAGTCAAAGTTCAGATAGAGAGTGTTGAGGTGGTGGGAGAATCCAGGAAGAATTCGCTCCGCAAAACGGACTCTTGGGATAGCGGCCTGACCTACAGCGACCAGAGACTGGATAGGGTTTCAGAACCACAGAGCCCTATACCTGGACTTGGAGGAAGAGAAGGACCAGCCCGTGATTTTTACCCCAGTAGCGAGAGCTCATTCCTGGCCTCGCTGCAGGAGGCCAGGGTGGAGCTGAGGACAGAGATCCAGGCTCTGAACGGAAGGATGGCGACTTTAGAAGAACGGGTTGGACAAATTCTCAGGCTACTTTTAGAGACTTCAAAGGCCTCATCTAGTGAAGACTCAAATCTGAAAACACATAGACCCAAACTTAAAGCACAGGGCAGCATCCCAGTGTCCACACTCACTACACCTGATTCTGAAAAGGATGAGGGATCGCCATAAGAGTTTTGAATTCACTAAGCATTTGAGATGAAGCATTTGTAGCATCACTTTTATGGTGCATCCACATCTGGCACCTATACCTGCAGCTCATAGAGGAACGTCCTAAATAGGAGCTGTGATTTTAGAGGATATAGTTGTCACTTGAACATCTGTATGGGAGCAGGAGTTGGTTTTTGAGTCTAAATAACTGCCAAGAACTCTAACCCTCTCAGAGTACAGTGGCAAGTACTGCTAA

Function

symbol description
kcnh5b Predicted to enable voltage-gated potassium channel activity. Predicted to be involved in potassium ion transmembrane transport and regulation of membrane potential. Predicted to act upstream of or within potassium ion transport; regulation of ion transmembrane transport; and transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human KCNH5 (potassium voltage-gated channel subfamily H member 5).
kcnh5 Predicted to enable voltage-gated potassium channel activity. Acts upstream of or within regulation of G2/M transition of mitotic cell cycle. Located in cell surface.

GO:

id name namespace
GO:0042391 regulation of membrane potential biological_process

KEGG:

id description
K04908 KCNH5, KV10.2; potassium voltage-gated channel Eag-related subfamily H member 5

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_04647182_04692241.mRNA True 3791 mRNA 0.51 14 4647182 4692476

Neighbor

gene id symbol gene type direction distance location
CI01000012_04595199_04620295 PPP2R5EB, 2A5E, PPP2R5E1, PPP2R5E coding upstream 26729 4593867 ~ 4620453 (+)
CI01000012_04578508_04582452 WDR89 coding upstream 64572 4576995 ~ 4582610 (+)
CI01000012_04551570_04571150 SGPP1 coding upstream 75843 4551169 ~ 4571339 (+)
CI01000012_04514814_04539220 SYT16 coding upstream 107583 4514814 ~ 4539599 (+)
CI01000012_04495631_04501066 NA coding upstream 146116 4495631 ~ 4501066 (+)
CI01000012_04722087_04836261 NA coding downstream 29611 4722087 ~ 4837574 (+)
CI01000012_04939174_04962741 TRIM9 coding downstream 245670 4938146 ~ 4962741 (+)
CI01000012_04966772_04976751 PYGL coding downstream 274239 4966715 ~ 4976903 (+)
CI01000012_04981435_05004449 NIN coding downstream 288959 4981435 ~ 5005112 (+)
CI01000012_05006941_05018373 SAV1 coding downstream 314465 5006941 ~ 5018880 (+)
G71442 NA non-coding upstream 5334 4641537 ~ 4641848 (+)
G71239 NA non-coding upstream 61961 4529356 ~ 4585221 (+)
G71238 NA non-coding upstream 141698 4481638 ~ 4505484 (+)
G71375 NA non-coding upstream 299802 4346804 ~ 4347380 (+)
G71208 NA non-coding downstream 14080 4706556 ~ 4710923 (+)
G71478 NA non-coding downstream 98180 4790656 ~ 4790866 (+)
G71237 NA non-coding downstream 100062 4792538 ~ 4850513 (+)
G71488 NA non-coding downstream 178112 4870588 ~ 4870819 (+)
G71490 NA non-coding downstream 182549 4875025 ~ 4875314 (+)
CI01000012_04424569_04425090 NA other upstream 221535 4424569 ~ 4425756 (+)
G70029 NA other upstream 2015797 2622478 ~ 2631385 (+)
G68725 NA other upstream 3962326 683523 ~ 684856 (+)
CI01000012_05177587_05180517 SRSF5A other downstream 484419 5176895 ~ 5180970 (+)
G71199 NA other downstream 720774 5413250 ~ 5416785 (+)
G71218 NA other downstream 843376 5535852 ~ 5538384 (+)
G71221 NA other downstream 846049 5538525 ~ 5540456 (+)
G71548 NA other downstream 858017 5550493 ~ 5561433 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_006825 kcnh5b coding NC_007124.7 CM002897.2 37302575 ~ 37383625 (-)