CI01000012_04424569_04425090


Basic Information

Item Value
gene id CI01000012_04424569_04425090
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 4424569 ~ 4425756 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_04424569_04425090.mRNA
CTGGTGCTGTTATTTTGACCCCGTTCGCGCTCTCCATGGCTGGGTTCTCTGCCGCCGGAATCACGGCTGGTTCTTTGGGAGCTGGAATGATGTCATCAGCAGCCATCGCCAACGGGGGCGGAGTGGCTGCGGGAAGTTTGGTCGCACTGCTCCAGTCGGCAGGTGCTGCTGGTATGTCTGCAGCTGCAACAGCTGGTGTGGCATCAGTGGGAGGCACTGCGGGGGGTCTGTTAGGAGGAGCTGTTGGTTTGTTGAAGAGGATGAGGAGATAAGGAATGTCCATTGAGCTTCTGATCACAAACACTGACAAAGTCAGTGCAGCTTTGCAATTATAATGTTGAAAAAATACCAGCTAAATTATCTAAATTTCATAGGTTCATGGCAAGGGCTTGCCCCACCTTTGTTAAATTAATTTATTAAAAAAAAGAAAAAAGAAGATGGATTGTGGCATTGGTACTAGGTCTTCATTAGAGCGTGTTGCTGGGTGCTATATAGACAAACGACTTTTGGACAAAAAGTATTGTCTGTAATGGGGAGTATTTATTGAAATAGCTTACCCAGGTCATTAAGACACTATTCTACATATTACACCTACAAAGATCACCTTAAAAAGTTGCTTATGTCGAACCAGAAGTGTAAACATTTTACTTGGTTATTTTAAATAATGTGTGGAGTATTTGGCTATTAATGCTTTATGTATATTTGAGTATGTGTCCTTGTGTACCTGCCTAGGGACTACGGATGTAAATTAGCAATGTTGCTATAATCCGGCTTGTTAAACTTTTGTATTTTATACTAATGTTCATAATTTAATTGCATTTATTGACCCTATTAAATAAATAAATAAATAAATTGAATCAAAAACAAATCTCTTTTCTTTCAGGTTTGAGGCAGATATTTTGCTTGTAAGTCAATTGTTTATTGTAAATGGCCATTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_04424569_04425090.mRNA False 938 mRNA 0.40 2 4424569 4425756

Neighbor

gene id symbol gene type direction distance location
CI01000012_04386557_04402516 NA coding upstream 21594 4386203 ~ 4402975 (+)
CI01000012_04371425_04373907 NA coding upstream 50578 4371425 ~ 4373991 (+)
CI01000012_04285964_04292319 NA coding upstream 130794 4285594 ~ 4293775 (+)
CI01000012_04266133_04266370 NA coding upstream 157143 4266133 ~ 4267426 (+)
CI01000012_04209791_04237026 NA coding upstream 187409 4209026 ~ 4237160 (+)
CI01000012_04436374_04437448 NA coding downstream 9524 4435280 ~ 4437599 (+)
CI01000012_04488201_04489863 NA coding downstream 62445 4488201 ~ 4489897 (+)
CI01000012_04495631_04501066 NA coding downstream 69875 4495631 ~ 4501066 (+)
CI01000012_04514814_04539220 SYT16 coding downstream 89058 4514814 ~ 4539599 (+)
CI01000012_04551570_04571150 SGPP1 coding downstream 125814 4551169 ~ 4571339 (+)
G71375 NA non-coding upstream 77189 4346804 ~ 4347380 (+)
G71305 NA non-coding upstream 185163 4239125 ~ 4239406 (+)
G71158 NA non-coding upstream 314293 4109941 ~ 4110276 (+)
G71156 NA non-coding upstream 317447 4106835 ~ 4107122 (+)
G71152 NA non-coding upstream 336327 4087869 ~ 4088242 (+)
G71238 NA non-coding downstream 55882 4481638 ~ 4505484 (+)
G71239 NA non-coding downstream 103600 4529356 ~ 4585221 (+)
G71442 NA non-coding downstream 215781 4641537 ~ 4641848 (+)
G71208 NA non-coding downstream 280800 4706556 ~ 4710923 (+)
G70029 NA other upstream 1793184 2622478 ~ 2631385 (+)
G68725 NA other upstream 3739713 683523 ~ 684856 (+)
G68660 NA other upstream 3888616 535566 ~ 535953 (+)
CI01000012_00194370_00195347 HCAR1-3 other upstream 4218795 193903 ~ 195676 (+)
CI01000012_05177587_05180517 SRSF5A other downstream 751139 5176895 ~ 5180970 (+)
G71199 NA other downstream 987494 5413250 ~ 5416785 (+)
G71218 NA other downstream 1110096 5535852 ~ 5538384 (+)
G71221 NA other downstream 1112769 5538525 ~ 5540456 (+)

Expression


Co-expression Network