CI01000012_04371425_04373907


Basic Information

Item Value
gene id CI01000012_04371425_04373907
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 4371425 ~ 4373991 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_04371425_04373907.mRNA
AATAACAGTTGGATCACGTCAAGCCACAGTTGAAAGCTTTGTGGGGGAGATTGCTGAAACATTCAGCAGCTTTTACTGTTGCGTTAGATATGCATTGCCATCTCGTGACAATAGCCGGCTCTGTTTCATTGAAATAGCTGTCACTAATGGAACTGCTAATCGGCAGCAGAAATACATGGGTGAGCCTGTGTCAGAGGTGGTGTTCGGCCCCACGTTTCTCGGTGGCGTTCCATCCGTCTCAGAGCTGCACCACAACAGTGGGAATGTCTCTGGATTCATCGGCTGCATACGGGAATTGCAGATGGGCTCCAAAGAGCTGCATGTGGTGGGGGAAGCAATCAGAGGCCAAAATATTCAGAACTGTGACACCACAGTCTGCCAGCATCAACCCTGCCGCAATGGAGGAACCTGTATCAGGTATGATTTCACTTCCTTCTTATTTGAAACTCTATTGGAGATAGAACCATCTCAACTTTAAATGGCTACATCCTACAAATAGTGTTTTCAATGTGTCTGTTAAAACAATATTTAGATGAAAATGACTGTAATTGGATGTGTCTCA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_04371425_04373907.mRNA True 562 mRNA 0.45 3 4371425 4373991

Neighbor

gene id symbol gene type direction distance location
CI01000012_04285964_04292319 NA coding upstream 77650 4285594 ~ 4293775 (+)
CI01000012_04266133_04266370 NA coding upstream 103999 4266133 ~ 4267426 (+)
CI01000012_04209791_04237026 NA coding upstream 134265 4209026 ~ 4237160 (+)
CI01000012_04179776_04184166 NA coding upstream 186975 4179776 ~ 4184450 (+)
CI01000012_04052923_04100797 NA coding upstream 270425 4052613 ~ 4101000 (+)
CI01000012_04386557_04402516 NA coding downstream 12212 4386203 ~ 4402975 (+)
CI01000012_04424569_04425090 NA coding downstream 50578 4424569 ~ 4425756 (+)
CI01000012_04436374_04437448 NA coding downstream 61289 4435280 ~ 4437599 (+)
CI01000012_04488201_04489863 NA coding downstream 114210 4488201 ~ 4489897 (+)
CI01000012_04495631_04501066 NA coding downstream 121640 4495631 ~ 4501066 (+)
G71375 NA non-coding upstream 24045 4346804 ~ 4347380 (+)
G71305 NA non-coding upstream 132019 4239125 ~ 4239406 (+)
G71158 NA non-coding upstream 261149 4109941 ~ 4110276 (+)
G71156 NA non-coding upstream 264303 4106835 ~ 4107122 (+)
G71152 NA non-coding upstream 283183 4087869 ~ 4088242 (+)
G71238 NA non-coding downstream 107647 4481638 ~ 4505484 (+)
G71239 NA non-coding downstream 155365 4529356 ~ 4585221 (+)
CI01000012_04551570_04571150 SGPP1 non-coding downstream 170873 4551169 ~ 4571339 (+)
G71442 NA non-coding downstream 267546 4641537 ~ 4641848 (+)
G71208 NA non-coding downstream 332565 4706556 ~ 4710923 (+)
G70029 NA other upstream 1740040 2622478 ~ 2631385 (+)
G68725 NA other upstream 3686569 683523 ~ 684856 (+)
G68660 NA other upstream 3835472 535566 ~ 535953 (+)
CI01000012_00194370_00195347 HCAR1-3 other upstream 4165651 193903 ~ 195676 (+)
CI01000012_05177587_05180517 SRSF5A other downstream 802904 5176895 ~ 5180970 (+)
G71199 NA other downstream 1039259 5413250 ~ 5416785 (+)
G71218 NA other downstream 1161861 5535852 ~ 5538384 (+)

Expression


Co-expression Network