Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000012_04052923_04100797 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 4052613 ~ 4101000 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000012_04052923_04100797.mRNA | False | 924 | mRNA | 0.44 | 6 | 4052613 | 4101000 |
| TU81107 | True | 318 | lncRNA | 0.44 | 1 | 4053683 | 4054000 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_03989870_04006406 | NA | coding | upstream | 46018 | 3989711 ~ 4006595 (+) |
| CI01000012_03736684_03742335 | LMBRD1 | coding | upstream | 309547 | 3736636 ~ 3743066 (+) |
| CI01000012_03633636_03709136 | LMBRD1 | coding | upstream | 343477 | 3633636 ~ 3709136 (+) |
| CI01000012_03414617_03418724 | NA | coding | upstream | 633205 | 3414617 ~ 3419408 (+) |
| CI01000012_03394096_03396897 | NA | coding | upstream | 655716 | 3393889 ~ 3396897 (+) |
| CI01000012_04179776_04184166 | NA | coding | downstream | 78776 | 4179776 ~ 4184450 (+) |
| CI01000012_04209791_04237026 | NA | coding | downstream | 108026 | 4209026 ~ 4237160 (+) |
| CI01000012_04266133_04266370 | NA | coding | downstream | 165133 | 4266133 ~ 4267426 (+) |
| CI01000012_04285964_04292319 | NA | coding | downstream | 184594 | 4285594 ~ 4293775 (+) |
| CI01000012_04371425_04373907 | NA | coding | downstream | 270425 | 4371425 ~ 4373991 (+) |
| G71134 | NA | non-coding | upstream | 8378 | 4042982 ~ 4044235 (+) |
| G71124 | NA | non-coding | upstream | 32307 | 4019905 ~ 4020306 (+) |
| G71038 | NA | non-coding | upstream | 87045 | 3825833 ~ 3965568 (+) |
| G71041 | NA | non-coding | upstream | 178025 | 3829728 ~ 3874588 (+) |
| G70327 | NA | non-coding | upstream | 438274 | 3549541 ~ 3614339 (+) |
| G71156 | NA | non-coding | downstream | 5835 | 4106835 ~ 4107122 (+) |
| G71158 | NA | non-coding | downstream | 8941 | 4109941 ~ 4110276 (+) |
| G71305 | NA | non-coding | downstream | 138125 | 4239125 ~ 4239406 (+) |
| G71375 | NA | non-coding | downstream | 245804 | 4346804 ~ 4347380 (+) |
| G71238 | NA | non-coding | downstream | 380638 | 4481638 ~ 4505484 (+) |
| G70029 | NA | other | upstream | 1421228 | 2622478 ~ 2631385 (+) |
| G68725 | NA | other | upstream | 3367757 | 683523 ~ 684856 (+) |
| G68660 | NA | other | upstream | 3516660 | 535566 ~ 535953 (+) |
| CI01000012_00194370_00195347 | HCAR1-3 | other | upstream | 3846839 | 193903 ~ 195676 (+) |
| CI01000012_04424569_04425090 | NA | other | downstream | 319239 | 4424569 ~ 4425756 (+) |
| CI01000012_04495631_04501066 | NA | other | downstream | 397453 | 4495631 ~ 4501066 (+) |
| CI01000012_05177587_05180517 | SRSF5A | other | downstream | 1075895 | 5176895 ~ 5180970 (+) |
| G71199 | NA | other | downstream | 1312250 | 5413250 ~ 5416785 (+) |
| G71218 | NA | other | downstream | 1434852 | 5535852 ~ 5538384 (+) |
| G71145 | NA | non-coding | downstream | 13613 | 4067613 ~ 4067833 (+) |
| G71152 | NA | non-coding | downstream | 33869 | 4087869 ~ 4088242 (+) |
