G71134


Basic Information

Item Value
gene id G71134
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 4042982 ~ 4044235 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU81102
GTTCGAACGTGGGCTCAGTATTGGCTGGCTCTGGTCACGTGAGCAACATGAAGCATGTGTTTGATGCTGATGCAGAAGCCGGCCAATACTGAGCCTATGTTCGGATGTAAACACTGAAGATCTGAAACGAAAACAATGCAGCAGAATGACAGGGGACAGATGAATTTGTTGAATAAAGTTGTTATTTTTGTTTTGTTTTTGCACACAAAAAGTATTCTCGTCGCTTTATAAAATTAAGGTTGAACCACTGCAGTCATGTTGACTTTTTTAATCATGTTTTCAACTACTTTTCTGGACCTCAAACGATGCAATGACATTGCTGCCTATGTGTGGATCAGATAACCTCAGATTTCATCAAAAATATCTTAATTTGTGTTCTGAAGATGAACGAAGGTCTTACGGGTGTGGGACGACATGAGGATTTCTGCAACACACCAAACATGGATGACAAGAGTGAATGACAAGGTTATGGCTCATCAATTTTAGGTCCCGGTCTAGTCCTGTCATGTCAAGCTCCGATCTGCCCTGTTCTCTGCCCAGTTTACCTGTGCCTGCAGTGCAACCCTCTCTGGTCCCAGATGTCTACAGGTTTCTGACTCATGCCTCAAGGTTTCTGCGCTTGCATCTCTTCTGGATTTGTTGATCTTTCCTGGACTCATTCTGGTTACCAATCTTTTCACGCGGCCTTTGACTATGCTCACCTGTCAGCCATGTACAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81102 True 720 lncRNA 0.44 3 4042982 4044235

Neighbor

gene id symbol gene type direction distance location
CI01000012_03989870_04006406 NA coding upstream 36387 3989711 ~ 4006595 (+)
CI01000012_03736684_03742335 LMBRD1 coding upstream 299916 3736636 ~ 3743066 (+)
CI01000012_03633636_03709136 LMBRD1 coding upstream 333846 3633636 ~ 3709136 (+)
CI01000012_03414617_03418724 NA coding upstream 623574 3414617 ~ 3419408 (+)
CI01000012_03394096_03396897 NA coding upstream 646085 3393889 ~ 3396897 (+)
CI01000012_04052923_04100797 NA coding downstream 8378 4052613 ~ 4101000 (+)
CI01000012_04179776_04184166 NA coding downstream 135541 4179776 ~ 4184450 (+)
CI01000012_04209791_04237026 NA coding downstream 164791 4209026 ~ 4237160 (+)
CI01000012_04266133_04266370 NA coding downstream 221898 4266133 ~ 4267426 (+)
CI01000012_04285964_04292319 NA coding downstream 241359 4285594 ~ 4293775 (+)
G71124 NA non-coding upstream 22676 4019905 ~ 4020306 (+)
G71038 NA non-coding upstream 77414 3825833 ~ 3965568 (+)
G71041 NA non-coding upstream 168394 3829728 ~ 3874588 (+)
G70327 NA non-coding upstream 428643 3549541 ~ 3614339 (+)
G70350 NA non-coding upstream 562897 3479640 ~ 3480085 (+)
G71145 NA non-coding downstream 23378 4067613 ~ 4067833 (+)
G71152 NA non-coding downstream 43634 4087869 ~ 4088242 (+)
G71156 NA non-coding downstream 62600 4106835 ~ 4107122 (+)
G71158 NA non-coding downstream 65706 4109941 ~ 4110276 (+)
G70029 NA other upstream 1411597 2622478 ~ 2631385 (+)
G68725 NA other upstream 3358126 683523 ~ 684856 (+)
G68660 NA other upstream 3507029 535566 ~ 535953 (+)
CI01000012_00194370_00195347 HCAR1-3 other upstream 3837208 193903 ~ 195676 (+)
CI01000012_04424569_04425090 NA other downstream 376004 4424569 ~ 4425756 (+)
CI01000012_04495631_04501066 NA other downstream 454218 4495631 ~ 4501066 (+)
CI01000012_05177587_05180517 SRSF5A other downstream 1132660 5176895 ~ 5180970 (+)
G71199 NA other downstream 1369015 5413250 ~ 5416785 (+)
G71218 NA other downstream 1491617 5535852 ~ 5538384 (+)

Expression


Co-expression Network