CI01000012_06713565_06749032


Basic Information

Item Value
gene id CI01000012_06713565_06749032
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 6713456 ~ 6749070 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_06713565_06749032.mRNA
ACTTGACCACTAAAAAAGCCAGTGTAACTGCTCCCAAGATGCACTGTGATTATGGAAACCCCATTAGAGGTGGTCAGGGACCAGCAATTTTGAAGACATTATCCAAGTGTAATTTTGCAGCCAGAGAAGACAATGAGGTAGTCTCCGACATATTCTTTGTCAAAAAATGGGGTCATGTTTCTTTAGGTGGATTCTTGATTTGCTCAGGCAGTTACCTTAATCTTCTCCTTTGTCCTCCTGATTACGGCTACAGTCCATACAGGCGACTAATTTTATTAAGGACTGGGAAAAGTTCTTTTTCATCTATGCAGATTAGCTTTTTGGCAGTCGTGTCCCGCAATTACTCAACGTTTACATCAACGTGTTTCACCCTGCCACTAATTAACAGGTGGCTTGGGAAAACATTTGGATCTGGGCTTTTAGGGTTAAATTCACACATCAAAGGATCCAATAGGCGAACGTTAAATCGATCTCAGACGATGTTTTCAGAGAGCCCGGATGGCTCGCATTATCATTATGTGATCCATACTGTCGGCCCAATCGCCAGAGGAAATGTGGGCCAGTCCCAAAAAGATGACCTTGAATCATGCTACAAAAACTCCCTCCAGCTGATGAAGGACAATAATTTGAGATCTGTGACAACCTCAGGCTTTAATGAAGCTGGCCAAAGACCAGCAGCTTTGGACCAGGAAGACATAGAGTCTGATCATGCACTGTTCCAGCTGCTGACCCTATCTCCACCATCTGGTGCGCATGAGTTATGGCTCTGTTTTAATCCATGGTGGCCACAACCAGAGGGGCCGTGCGCAAGGCAGACCAATCAGCTCCTCCATCCAGACCAGCAGAGGCCCCTGAGAGGATCTCTCACAATTAGCCATGATGAGACAGTCTTTGTGGGACAAATCGCTAACTTCGGCACTTGATGAACCGCTTTAATCACACTGTGAGGATGGAGAGGTCTGCAGTCATCATCATTTCAAGGGTGGAATTGTGTAGTTAAGGTCGCACGAATTCACTTTTGGCTGCAAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_06713565_06749032.mRNA True 1032 mRNA 0.46 7 6713456 6749070

Neighbor

gene id symbol gene type direction distance location
CI01000012_06694889_06695185 NA coding downstream 18233 6694787 ~ 6695223 (-)
CI01000012_06597401_06599198 NA coding downstream 112756 6597288 ~ 6600700 (-)
CI01000012_06496870_06580459 NA coding downstream 132537 6496143 ~ 6580919 (-)
CI01000012_06406744_06433128 TASP1 coding downstream 280328 6406744 ~ 6433128 (-)
CI01000012_06147833_06153076 NA coding downstream 559253 6147695 ~ 6154203 (-)
CI01000012_06872835_06911259 NA coding upstream 123645 6872715 ~ 6911968 (-)
CI01000012_06979304_06984075 NA coding upstream 230226 6979296 ~ 6984944 (-)
CI01000012_06989295_06990487 NA coding upstream 239862 6988932 ~ 6990843 (-)
CI01000012_07032479_07034631 NA coding upstream 283383 7020730 ~ 7035201 (-)
CI01000012_07092852_07097731 EPHX5 coding upstream 343782 7092852 ~ 7097731 (-)
G74215 NA non-coding downstream 176819 6534877 ~ 6536637 (-)
G74066 NA non-coding downstream 385328 6327892 ~ 6328128 (-)
G74063 NA non-coding downstream 388886 6324358 ~ 6324570 (-)
G72707 NA non-coding downstream 409393 6303741 ~ 6304063 (-)
G72699 NA non-coding downstream 415949 6297200 ~ 6297507 (-)
G74142 NA non-coding upstream 20763 6769833 ~ 6858642 (-)
G74252 NA non-coding upstream 265795 7014865 ~ 7020574 (-)
G74117 NA non-coding upstream 289426 7038496 ~ 7053630 (-)
G72629 NA other downstream 565962 6147011 ~ 6147494 (-)
G72294 NA other downstream 1247599 5462840 ~ 5465857 (-)
CI01000012_05414096_05416676 TTC9 other downstream 1296676 5413369 ~ 5416780 (-)
G72204 NA other downstream 1411250 5293773 ~ 5302206 (-)
G72068 NA other downstream 1933324 4776220 ~ 4780132 (-)
CI01000012_07356934_07358497 NA other upstream 606182 7356863 ~ 7358612 (-)
G74648 NA other upstream 1515259 8264329 ~ 8265654 (-)
G74701 NA other upstream 1617949 8367019 ~ 8367643 (-)
CI01000012_09068458_09070536 NA other upstream 2318836 9067906 ~ 9070765 (-)
CI01000012_09071892_09073410 NA other upstream 2322301 9071371 ~ 9073457 (-)

Expression


Co-expression Network