CI01000012_06979304_06984075



Basic Information


Item Value
gene id CI01000012_06979304_06984075
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 6979296 ~ 6984944 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000012_06979304_06984075.mRNA
ATAAACCAGCTGTACAGACTGTGTTGTATGTGTCATCTTCGAAGAGCTTTTGAAGACCTTTGTACAGTCGGGTCTGTTCCTGACCTGAGCAGACCCTTTTGGAGAAGCGGTTATTGTCTTGTGCTTAAACTCTTTGCAAGCAGATATGGTTCTTCTACCCTTATTGTTAAGGGTATAGTTCACCCAAAAATTCATTTGCTAACCCTCATGTCGTAGTAAACTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGTCAATCTTTTTCATATAATGGAAGTGAATGAGGATTGGGGTTGTCAAGCTACAAAATAACAAAAAAAGCAACATAAATAAGGTGGTACGTACTCCACGCCATGGTGCATTTCTGTCATTATAATGAAAATAGTGGCCAGTAAATTCTTTAAAAAAAAAATCTGTTCCACAGAAAAAGGTTTTGAATGACATTACAGTGAGTGATGATAAATGATGATAATTTTTAGATGTACTAACCCCTTCATGTATGGCTTTTTTTAATTTGAAAACTGAGCATATACTTCTACTCTTCTGACCTTTTTGAGTGCTCAGATTATTAGTTTATAGTTTGATGATCTTTTACATATTTGTGTTTCCCGTAAAGGAGCTGATATACCTCACAGAGTTTGGGTCTGTCAGTGATTAAATTCTAGTGGCCTTCAGTAGAATAGATATGGTTGACCTGCTTTCACTACTGTGTGGCTTGACTGTTGACTAGACTGCCAAAGTTTAGGACAGACATGAAGGTTAGACGTTGTCCCTTTTCCAAAAACCTCCCTGATTGTTTGCTAAAATTCTATAAATTCTATAGAAAATTCTAGCTTTACAAGTATCCATTGGAAGATTAAGTATCTGAATAATGTCCTATCCACCCTGTGCTTTTACAGCGGGTCTAAGTGTCGTGTTTTTAGGGTCAGAGGTGGAGAAGCAGGGCACAGTCGTAGAGACCTCCGCAATATGGCAGAATGTGAATTGCAGGATGGGGTCCAGCTTCATGTACAAGTGTTCATGCTCATGGCAGCATGATAGAGTGGAGATGAATTATTTCCTGCCCTTTCCTGTACTGTATGACCAGTCCAACAGCCCCATTTTGAGATGGGATGTTGCCTTACATGACAAAGAGGAAGCAATGCTTAATGACATTAAAGGTTTGCTGACACAAACAGTTGAACAAATTGTAGATAAGCTTGATAAAGCAGTATTCTTAGTCATTACAGACCTGTCTACTCCCGCTGATTTGGCTAGATTTCAGGAAGTTTCATTTGGCAGTGTGCACAAAGAGAGTTACATAATGATTAAAGCTGTTGATGTAGAGGTGTTTTTCTTAACACCTCAGAAGCATCTGTGTGCCCCAGCGTTCTCGAGCGCTTGTGTGAGTGATGTATCAAATGTACCCCATGTCTTTGTGAAGAACGGCTCAAGAGCGGATAGGAATGGAATGATGACAGCGACCGTTGTTCCCAAAGTGAACTGGCAATTTGTCGCTGCCGTTTGGGATGATGAAAGCTGAGGATTAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000012_06979304_06984075.mRNA True 1528 mRNA 0.39 5 6979296 6984944

Neighbor


gene id symbol gene type direction distance location
CI01000012_06872835_06911259 NA coding downstream 67328 6872715 ~ 6911968 (-)
CI01000012_06713565_06749032 NA coding downstream 230226 6713456 ~ 6749070 (-)
CI01000012_06694889_06695185 NA coding downstream 284073 6694787 ~ 6695223 (-)
CI01000012_06597401_06599198 NA coding downstream 378596 6597288 ~ 6600700 (-)
CI01000012_06496870_06580459 NA coding downstream 398377 6496143 ~ 6580919 (-)
CI01000012_06989295_06990487 NA coding upstream 3988 6988932 ~ 6990843 (-)
CI01000012_07032479_07034631 NA coding upstream 47509 7020730 ~ 7035201 (-)
CI01000012_07092852_07097731 EPHX5 coding upstream 107908 7092852 ~ 7097731 (-)
CI01000012_07113504_07118919 MGME1 coding upstream 128412 7113356 ~ 7119168 (-)
CI01000012_07164949_07166936 NA coding upstream 179895 7164839 ~ 7166936 (-)
G74142 NA non-coding downstream 120654 6769833 ~ 6858642 (-)
G74215 NA non-coding downstream 442659 6534877 ~ 6536637 (-)
G74066 NA non-coding downstream 651168 6327892 ~ 6328128 (-)
G74063 NA non-coding downstream 654726 6324358 ~ 6324570 (-)
G74252 NA non-coding upstream 29921 7014865 ~ 7020574 (-)
G74117 NA non-coding upstream 53552 7038496 ~ 7053630 (-)
G74255 NA non-coding upstream 116481 7101425 ~ 7101860 (-)
G74256 NA non-coding upstream 117246 7102190 ~ 7102463 (-)
G72629 NA other downstream 831802 6147011 ~ 6147494 (-)
G72294 NA other downstream 1513439 5462840 ~ 5465857 (-)
CI01000012_05414096_05416676 TTC9 other downstream 1562516 5413369 ~ 5416780 (-)
G72204 NA other downstream 1677090 5293773 ~ 5302206 (-)
G72068 NA other downstream 2199164 4776220 ~ 4780132 (-)
CI01000012_07356934_07358497 NA other upstream 370308 7356863 ~ 7358612 (-)
G74648 NA other upstream 1279385 8264329 ~ 8265654 (-)
G74701 NA other upstream 1382075 8367019 ~ 8367643 (-)
CI01000012_09068458_09070536 NA other upstream 2082962 9067906 ~ 9070765 (-)
CI01000012_09071892_09073410 NA other upstream 2086427 9071371 ~ 9073457 (-)

Expression



Co-expression Network