CI01000012_06989295_06990487


Basic Information

Item Value
gene id CI01000012_06989295_06990487
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 6988932 ~ 6990843 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_06989295_06990487.mRNA
TGTGCTGCCAGGATAACCGTGTTCGTTGTTCTGTCTGCCACTAACCCTAACATCCCCCCTCTAGTGTTCTCTATGGTGATGGCTGAAAAGAATTCCTTTGCATAAGAAAAGCGACCACGGTTTGGGCCCTGCGACAATGACCAAAGACCGCTCCCTCCTGCCTGCCGACGTTCTCCACTGAGCTGTGCTTTCAAAGTGGCTAAAGATGCTCTAGAAGGAGAAGGTGAAGGTAAAAATAAGAGTCATGGTGAAGCATATTGCTGCTGAGGTGTCGAGCAGCCACCAAAGGTCCCTCGGGCTGCCCCGACAGCACCTGAACACAACGCCCTCGCACTGCTCAAAAATGTACATGTGAGATGAACACGTTTTATGTCTTGCAGACTCATGAATACCCAAATGGGCTCTTCATGCAAGTCACCTCCGGTGGCCCTAAAGAGACGTCTATGCTGCACCTTCCATACTATAATTTCCCACGATACATCATTCTGGTTAGACTGACAATATACATTTCTCCAACTGAAAGCCAGCACCACGGAGCGGGAAAAAAGGAAGTTGGCGATACACAAGCCCCTTTGGGTTTTTTTCTGCCAAGATACTTCCCTGAAAATTTAAGGGTTCACTCACAGGTGGCTGTTTATTTCATGATATTTCAGCTGAGATCTTACGCAGGAGACCTTGGTAAAAGCACAGGTGTCTTGGGAAATATATATGGGCCAGTATTATGTTATGGTCTTAAAGGTCAAACAGAAAAGAAGGGAGGGCATCTACCTTATACGCTTCACCTAAGCTTGTCATGCCAGCTGTCTCAATGGGTCATGCAAACCTTGATCTGGCTGGATGATTGGCTGCATTATCATTTTTCTTTTCCCCCTGGCTCTTCAGATTTCACTGAAGTGGCAGTGGTCCTTTGTTCATTACAAGTTAAGCATAAGGGCCCTGGCCTTCTGCTTTACTGAACTTCTTTCACTTAGAATTATTAGCTTTTTCACATTTGGTTAAATCTTCCAGCCCCTATCCCACCCACTGCTCATAGCCAGAGAAAAAAAGCCACTGAATGTGACGGGCACCTCTCACTATCGTTCTAATAGCCCACGTTTCCCGTTAGGAGATCGTTCTAATGGCTAGGCCTGCTTCTGCTTCATTGCTCTGCTTGAAGTGATGTTCAATCGAGCATTCTGGTTAAAATGGCCACAGCCAACTACCTTTTGCTTGTTTAGTGTCTTGAGTTCTGAACACTAGGGTTGGGGCACTGTGAAATGGGTTAAAAAAAGCATTTAAGGGAAAAAAATCATATTTGAATGTGATTGTGCAACATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_06989295_06990487.mRNA True 1319 mRNA 0.45 2 6988932 6990843

Neighbor

gene id symbol gene type direction distance location
CI01000012_06979304_06984075 NA coding downstream 3988 6979296 ~ 6984944 (-)
CI01000012_06872835_06911259 NA coding downstream 76964 6872715 ~ 6911968 (-)
CI01000012_06713565_06749032 NA coding downstream 239862 6713456 ~ 6749070 (-)
CI01000012_06694889_06695185 NA coding downstream 293709 6694787 ~ 6695223 (-)
CI01000012_06597401_06599198 NA coding downstream 388232 6597288 ~ 6600700 (-)
CI01000012_07032479_07034631 NA coding upstream 41610 7020730 ~ 7035201 (-)
CI01000012_07092852_07097731 EPHX5 coding upstream 102009 7092852 ~ 7097731 (-)
CI01000012_07113504_07118919 MGME1 coding upstream 122513 7113356 ~ 7119168 (-)
CI01000012_07164949_07166936 NA coding upstream 173996 7164839 ~ 7166936 (-)
CI01000012_07210006_07251043 NA coding upstream 218752 7209595 ~ 7251043 (-)
G74142 NA non-coding downstream 130290 6769833 ~ 6858642 (-)
G74215 NA non-coding downstream 452295 6534877 ~ 6536637 (-)
G74066 NA non-coding downstream 660804 6327892 ~ 6328128 (-)
G74063 NA non-coding downstream 664362 6324358 ~ 6324570 (-)
G74252 NA non-coding upstream 24022 7014865 ~ 7020574 (-)
G74117 NA non-coding upstream 47653 7038496 ~ 7053630 (-)
G74255 NA non-coding upstream 110582 7101425 ~ 7101860 (-)
G74256 NA non-coding upstream 111347 7102190 ~ 7102463 (-)
G72629 NA other downstream 841438 6147011 ~ 6147494 (-)
G72294 NA other downstream 1523075 5462840 ~ 5465857 (-)
CI01000012_05414096_05416676 TTC9 other downstream 1572152 5413369 ~ 5416780 (-)
G72204 NA other downstream 1686726 5293773 ~ 5302206 (-)
G72068 NA other downstream 2208800 4776220 ~ 4780132 (-)
CI01000012_07356934_07358497 NA other upstream 364409 7356863 ~ 7358612 (-)
G74648 NA other upstream 1273486 8264329 ~ 8265654 (-)
G74701 NA other upstream 1376176 8367019 ~ 8367643 (-)
CI01000012_09068458_09070536 NA other upstream 2077063 9067906 ~ 9070765 (-)
CI01000012_09071892_09073410 NA other upstream 2080528 9071371 ~ 9073457 (-)

Expression


Co-expression Network