CI01000012_06990634_06991686


Basic Information

Item Value
gene id CI01000012_06990634_06991686
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 6990634 ~ 6991848 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_06990634_06991686.mRNA
AGCATCTTTAGCCACTTTGAAAGCACAGCTCAGTGGAGAACGTCGGCAGGCAGGAGGGAGCGGTCTTTGGTCATTGTCGCAGGGCCCAAACCGTGGTCGCTTTTCTTATGCAAAGGAATTCTTTTCAGCCATCACCATAGAGAACACTAGAGGGGGGATGTTAGGGTTAGTGGCAGACAGAACAACGAACACGGAGGTTCAGCATGTGAGAGGGAGTGGGTGTCTGCACGTCAGGCACAGGTTTGTGAAACGAGAGCCAAGGAGCCAGAGTGCTACAGCAGCACAGGAGATTCTGCTTTCGAGCCACGAGGCTGGATACTTTATTCATGCTCCTGCCAGGAGTGAGACTACAGGATTCGGGGCTGACTTTGGAGCCTGACTTCAGAACCGAACCGCCCTGGATTTGAGCCCAACGTACTGCAGACGGACAGTGGTCTTAACGCCATGACCAGTCTGCTTCGGGAGAGACGGGAGCAGTTCACTTCTCGAAGAGGACTATCTATTGCACACAAAAGGGTGTGATTAGGAATCGCAACTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_06990634_06991686.mRNA True 541 mRNA 0.52 2 6990634 6991848

Neighbor

gene id symbol gene type direction distance location
CI01000012_06938165_06970627 NA coding upstream 19733 6937590 ~ 6970901 (+)
CI01000012_06862144_06865773 NA coding upstream 124556 6861542 ~ 6866078 (+)
CI01000012_06826817_06842273 NA coding upstream 148105 6825923 ~ 6842529 (+)
CI01000012_06651665_06682236 NA coding upstream 307934 6651588 ~ 6682700 (+)
CI01000012_06620470_06637571 NA coding upstream 352945 6620060 ~ 6637689 (+)
CI01000012_06993214_06995298 FLRT3 coding downstream 1205 6993053 ~ 6995777 (+)
CI01000012_07008711_07010256 NA coding downstream 15454 7007302 ~ 7011132 (+)
CI01000012_07038865_07063702 NA coding downstream 46906 7038754 ~ 7064005 (+)
CI01000012_07089179_07092023 NA coding downstream 96635 7088483 ~ 7092030 (+)
CI01000012_07104155_07105373 NA coding downstream 112214 7104062 ~ 7105580 (+)
CI01000012_06441231_06476986 KIF16BB non-coding upstream 394117 6441192 ~ 6477104 (+)
G72760 NA non-coding upstream 429023 6557200 ~ 6561611 (+)
G72713 NA non-coding upstream 591994 6397486 ~ 6398640 (+)
G72731 NA non-coding upstream 593624 6396744 ~ 6397010 (+)
G72757 NA non-coding downstream 82818 7074666 ~ 7087621 (+)
G73150 NA non-coding downstream 239338 7231186 ~ 7231443 (+)
G73223 NA non-coding downstream 267978 7259826 ~ 7260038 (+)
G73224 NA non-coding downstream 269012 7260860 ~ 7261065 (+)
G73253 NA non-coding downstream 346922 7338770 ~ 7338975 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 1066329 5922385 ~ 5929186 (+)
G71623 NA other upstream 1174029 5813517 ~ 5816605 (+)
G71548 NA other upstream 1429201 5550493 ~ 5561433 (+)
G71221 NA other upstream 1450178 5538525 ~ 5540456 (+)
G71218 NA other upstream 1452250 5535852 ~ 5538384 (+)
CI01000012_07806089_07811902 BEND3 other downstream 814255 7805248 ~ 7811902 (+)
G73578 NA other downstream 1374958 8366806 ~ 8367627 (+)
CI01000012_10223957_10235955 NA other downstream 3230107 10223697 ~ 10236276 (+)
G75533 NA other downstream 4152969 11144817 ~ 11145739 (+)
G76385 NA other downstream 5638907 12630755 ~ 12675666 (+)

Expression


Co-expression Network