CI01000012_07089179_07092023


Basic Information

Item Value
gene id CI01000012_07089179_07092023
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 7088483 ~ 7092030 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_07089179_07092023.mRNA
ATATAAAAAGTATTTTGAAAACATCAGAATCTGTTGCTTTAAGGCATTAATTAACTATAAAGATGTGTACATTTGGAAATTCTTTTATAACTATTGAGTGCTACAAATGTCTTGTTGGAAGGTCCATCATGTGTCAACATCTTATTTTGTCATTCTTATCATTTATCACCCTATTCCATAAATATTTTCATATTCTCTGTATTTAATTGGGGGAAAAAATTCAGCAAGACATGATTTAGGCACATAAAACTCTATAAAGAATCTATGCAAAAGTCTCTTCAGGCCTCCTGGCTAGAGCACAGAATGTTTATAGAAGCACAAAGACCTCCATTGTTGTCAAATAACCATCAATCTTGCAATAACATAACAGCATTCAGTCAAGAATGGCCAAGAACCTAATGGTCCCGATAGGATTATATGAAAAAGTCAACCTGCAGAGGGCGTCAATTAACCGCTTCTTTGAAACCCGAAGAGAAAACAAAAAAGAAACATTTCCAAACATACAGGAATTAAATAAATCTGATTTTGCTCTGCCGTGAACATTTTAACCAAACATTTTTTATATATATATATATATAAAAAAACTTAAATAAAAAATGAGAAGAAAAATGCAAGACTCTTATTACATTTCTCGTGATTTCCGGTTCCCGTGTTTCCCATGATGCCGTGCCCGGTGGGTAAATTCAAACAGTAGAAATGGAAGAGGGATCGAGGAGGAGAGAGATTGTGTGTGCAAAAATGACTGTCACCAAACACAGCAACACCAACGAAACTTCTAACAGCAGCTACAACGACAAACTTCTTCACACCAATCAATGCACATTTCACGAAGAAGAAACGAAGGTTTTATCTGATGGAGAAACGGAAAGGAACATTTTGTGCCATGTCGATGATCCTGATTCCTCCCCTCAGTCTCAGGTGGAAAATATGTGTCTGCTGGACAACATTGGTGAGACTGAGAGAGACAGGGTTTGTGTGGAACCCTTTAACCAATCAGGGGACAAAGAAAATAGAAATAGCCCCACACATGCAAGAACAGAAGATAGAGGAGAGGATCATGATGTAGGTTACCAGCAGACCAATGCTTTGGCCAGTTCTTCTGGCAGTCAGAGGGAATCTACTGGAATGTCTGCATACCACGTTGATGATGAGGAAATATTCAGGAGAGCAAGAGAGGAAGGACGAGTGAATGTCGTCTTCCCTGGGCGCATTACCCAGGACGGTTGCTGTAGATTAGTTTGTGAGCTTCTGAAGTGTGTCCTTTACCAGCGGCAACAGATGCCCATGACATATGACCAAATGGTGTTCCTGCAGAAACAGCAGCATAATACCACTCAGACGGAGGACATGGTGAACCGACGGCCTTCAAAAGCATCAGGGGGCTTAGACTGGCGCCGGTGCCAGCGGACTTTGCAGGAGCTGGATGAGGTGCTGGCACACCTTGAGGCACTATTCTCTCTTACCCATGTTCCCCGTGTGCTTTTCCTGCTGGGTGGGTCTATCATCCTTCCCAGTGAGCTGTACGAGGTCAACATGGAAGCGGTGGCTGTTGGAGCTGGGGAAAACAGCTTAAGGACCTCAAGCTGTCTAAGACAGCTTTTCCGGACTCTATTTGTGGCCGACCTGTTGTCGGATGCCAAGTCTGTGCGTCTCATGACCACCACGGTCATGGCTCTGGGGCACAGGGATTGTGGTGTGACTGGGTTTAAACCCAAAGTGGATTTTAAATTTCCCACAAAAGTGAAAAAGCAAGTCATCTCTATAGCTAGTGATTTGTCACTTGCCGGGGAACTAGAAAAAAGTAAGAGAGACCTAGAGGACTATATATGGTTCCAGGCCCCTGTCACTGTGAAAGGATTCTGTAAATGATGAGGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_07089179_07092023.mRNA True 1876 mRNA 0.43 3 7088483 7092030

Neighbor

gene id symbol gene type direction distance location
CI01000012_07038865_07063702 NA coding upstream 24478 7038754 ~ 7064005 (+)
CI01000012_07008711_07010256 NA coding upstream 77351 7007302 ~ 7011132 (+)
CI01000012_06993214_06995298 FLRT3 coding upstream 92706 6993053 ~ 6995777 (+)
CI01000012_06990634_06991686 NA coding upstream 96635 6990634 ~ 6991848 (+)
CI01000012_06938165_06970627 NA coding upstream 117582 6937590 ~ 6970901 (+)
CI01000012_07104155_07105373 NA coding downstream 12032 7104062 ~ 7105580 (+)
CI01000012_07108281_07109521 NA coding downstream 16251 7108281 ~ 7109922 (+)
CI01000012_07111569_07113225 NA coding downstream 19539 7111569 ~ 7113232 (+)
CI01000012_07120539_07126148 SNX5 coding downstream 28509 7120539 ~ 7126272 (+)
CI01000012_07136101_07161117 RRBP1A, RRBP1 coding downstream 43987 7136017 ~ 7161548 (+)
G72757 NA non-coding upstream 862 7074666 ~ 7087621 (+)
CI01000012_06826817_06842273 NA non-coding upstream 246059 6825923 ~ 6842529 (+)
CI01000012_06441231_06476986 KIF16BB non-coding upstream 491966 6441192 ~ 6477104 (+)
G72760 NA non-coding upstream 526872 6557200 ~ 6561611 (+)
G72713 NA non-coding upstream 689843 6397486 ~ 6398640 (+)
G73150 NA non-coding downstream 139156 7231186 ~ 7231443 (+)
G73223 NA non-coding downstream 167796 7259826 ~ 7260038 (+)
G73224 NA non-coding downstream 168830 7260860 ~ 7261065 (+)
G73253 NA non-coding downstream 246740 7338770 ~ 7338975 (+)
G73254 NA non-coding downstream 252565 7344595 ~ 7344915 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 1164178 5922385 ~ 5929186 (+)
G71623 NA other upstream 1271878 5813517 ~ 5816605 (+)
G71548 NA other upstream 1527050 5550493 ~ 5561433 (+)
G71221 NA other upstream 1548027 5538525 ~ 5540456 (+)
G71218 NA other upstream 1550099 5535852 ~ 5538384 (+)
CI01000012_07806089_07811902 BEND3 other downstream 714073 7805248 ~ 7811902 (+)
G73578 NA other downstream 1274776 8366806 ~ 8367627 (+)
CI01000012_10223957_10235955 NA other downstream 3129925 10223697 ~ 10236276 (+)
G75533 NA other downstream 4052787 11144817 ~ 11145739 (+)
G76385 NA other downstream 5538725 12630755 ~ 12675666 (+)

Expression


Co-expression Network