Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000012_07401962_07405598 |
| gene name | NUSAP1 |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 7401962 ~ 7405598 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| symbol | description |
|---|---|
| nusap1 | Predicted to enable microtubule binding activity. Acts upstream of or within neural crest cell migration. Predicted to be located in spindle microtubule. Predicted to be active in mitotic spindle and nucleolus. Is expressed in blood island; brain; head; neural crest; and proliferative region. Orthologous to human NUSAP1 (nucleolar and spindle associated protein 1). |
| id | name | namespace |
|---|---|---|
| GO:0005856 | cytoskeleton | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000012_07401962_07405598.mRNA | True | 1371 | mRNA | 0.48 | 12 | 7401962 | 7405598 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_07359292_07362314 | NA | coding | upstream | 39584 | 7358715 ~ 7362378 (+) |
| CI01000012_07348648_07352865 | NA | coding | upstream | 48753 | 7348648 ~ 7353209 (+) |
| CI01000012_07312430_07315865 | BTBD6A | coding | upstream | 86045 | 7311672 ~ 7315917 (+) |
| CI01000012_07136101_07161117 | RRBP1A, RRBP1 | coding | upstream | 240414 | 7136017 ~ 7161548 (+) |
| CI01000012_07120539_07126148 | SNX5 | coding | upstream | 275690 | 7120539 ~ 7126272 (+) |
| CI01000012_07409605_07427042 | RTF1 | coding | downstream | 3394 | 7408992 ~ 7427309 (+) |
| CI01000012_07429147_07434790 | GOLGA5 | coding | downstream | 23549 | 7429147 ~ 7434846 (+) |
| CI01000012_07441851_07459661 | TRIP11 | coding | downstream | 36253 | 7441851 ~ 7459786 (+) |
| CI01000012_07464278_07478699 | FBLN5 | coding | downstream | 58680 | 7464278 ~ 7478992 (+) |
| CI01000012_07480048_07492395 | NA | coding | downstream | 74450 | 7480048 ~ 7492766 (+) |
| G73162 | NA | non-coding | upstream | 1685 | 7395368 ~ 7400277 (+) |
| G73258 | NA | non-coding | upstream | 29148 | 7372589 ~ 7372814 (+) |
| G73257 | NA | non-coding | upstream | 29554 | 7372072 ~ 7372408 (+) |
| G73255 | NA | non-coding | upstream | 54060 | 7347650 ~ 7347902 (+) |
| G73181 | NA | non-coding | upstream | 56181 | 7345506 ~ 7345781 (+) |
| G73262 | NA | non-coding | downstream | 15095 | 7420693 ~ 7421889 (+) |
| G73175 | NA | non-coding | downstream | 302077 | 7707675 ~ 7715446 (+) |
| G73321 | NA | non-coding | downstream | 328698 | 7734296 ~ 7734698 (+) |
| G73346 | NA | non-coding | downstream | 396323 | 7801921 ~ 7802123 (+) |
| G73359 | NA | non-coding | downstream | 449745 | 7855343 ~ 7855654 (+) |
| CI01000012_05923216_05928055 | SRD5A2B | other | upstream | 1477657 | 5922385 ~ 5929186 (+) |
| G71623 | NA | other | upstream | 1585357 | 5813517 ~ 5816605 (+) |
| G71548 | NA | other | upstream | 1840529 | 5550493 ~ 5561433 (+) |
| G71221 | NA | other | upstream | 1861506 | 5538525 ~ 5540456 (+) |
| G71218 | NA | other | upstream | 1863578 | 5535852 ~ 5538384 (+) |
| CI01000012_07806089_07811902 | BEND3 | other | downstream | 400505 | 7805248 ~ 7811902 (+) |
| G73578 | NA | other | downstream | 961208 | 8366806 ~ 8367627 (+) |
| CI01000012_10223957_10235955 | NA | other | downstream | 2816357 | 10223697 ~ 10236276 (+) |
| G75533 | NA | other | downstream | 3739219 | 11144817 ~ 11145739 (+) |
| G76385 | NA | other | downstream | 5225157 | 12630755 ~ 12675666 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | XLOC_006751 | nusap1 | coding | NC_007124.7 | CM002897.2 | 33251721 ~ 33256667 (-) |
