CI01000012_07464278_07478699 (FBLN5)


Basic Information

Item Value
gene id CI01000012_07464278_07478699
gene name FBLN5
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 7464278 ~ 7478992 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_07464278_07478699.mRNA
GGGGCTGTCTATCTTTGATGGGATCCAGCTGTTGGCCAAGTGCTCTGGGGGCCCGTTTATTTGCATTGCTAAACAATCCGTGGAGTGGTTCGAGTACGGAGAAACACAGCAAGTTTTCTATTTTTTATATAGGCGGCCGCAGCGGGTGACCAAAGCCAAGTGTCTCGACATTCAAGTGAACGCGCGTACGCGGAGGGGGCGTTTTGGGTACTCCGTTTTGCGCATTGGGTCCTGCGAGCCCGTAAAGAATGTTGTCAGTTTTAATATGTATCATATGCTGCATTCACTCTGGGACAAGTCAGCTGTTAACATTTTCTCACATATACTTTCAGACATTGATGAATGCCGGACACTGCCAGACCCATGTCGGGGTGACATGCAGTGTGTAAATCAAAACGGTGGATACCTGTGCATCCCCCGTGGACTCTACTCCCAATCTTACGCCCGCAACAGCCCACGCTCCTACCCTGAGTCTTCCTATCCTGAAGAGTCCTACCCTGACAGATCGCTGGGATATTCTGAACCGTTCATTCCAGGCGGTCCTCCTGTGGGAGCAGGCCCTGGTCCAGGCCCCGGCCCGAGCTACCCAATAGTGAGCCGGTCCACTCCCTGCCTCCTCGGATATACGCTTGGTATTGATGGCACTTGTGTTGATGTCGATGAATGCGAGACAGAGTCACACCAGTGTAACCCGACTCAGGTGTGTATAAATACAGCCGGTGGATATACCTGCTCATGTACTGAGGGCTATTGGCTGGTGGGTGGACAGTGCCAAGACATTGATGAGTGTCGCTATGGTTACTGCCAGCAGCTGTGCGCTAATGTCCCTGGCTCATATTCCTGCTCCTGTAGTCCGGGGTTCCTTCTTAATACAGATAGCAGGACATGCCAAGATGTGGACGAGTGTGAGACAAACCCTTGCTCTCACGGCTGTTTAAATACATACGGCTCATTCATGTGCACCTGTGACGAGGGGTTCGAGCTCGCCTCTGATGGGACGACCTGTAACGATCTGGACGAGTGCAGTTTCTCAGACTTCCTTTGTCAGCACACGTGTGTGAACACGCCAGGATCATTCTCCTGCGTGTGTCCGCCTGGATATTATGTGTATGAGGATGGAAGGAGCTGTGAAGATCTCAATGAATGTGAGTCTGGTAACAACACCTGTACAACAGCACAAGTGTGTTTCAATTTCCAGGGAGGTTACACATGTCTGGACCCTCTTAGATGTGATCCACCTTACATAGAGCTCAGTGACAATCAGTGCATGTGTTCTGCGGAGAATCCCGCATGTCGGGAAAGACCCTTTACTATCCTCTATAGGCATATGGATTTGTCTTCTGGCCGCAGTGTTCCTGCCGACATATTTCAGATGCAGGCCACCACACGTTACCCTGGAGCATTTTACATCTTTCAGATCAAGTCTGGCAACCAGGGGAGAGAGTTTTACATGCGGGTAAAGAGAGCCTGGTCAATCAATAAACAAAAATTTGATGACCTGAAATTGTGTTTGTTTGTGTTCACTTTTAGCAAATATAGACTGATGCATAGAAAGTTTATAATGGGCATTAAGTGATTATAATTAACAGTAAGGTGCTTAATGAAATGAGACAATTATAACAAAAACATAGAGAGGGGGGTTGGGTTTGGAGCGATTTACACAAGTTTTATATATGGCTTATTCAGGATAATTGTGAGTGTTTCATTGCTGTATATAGAATGGCGCCGGCGGGCACTAGGACCCAACAGTAGTCAGAAGTTTTCTCGCTCACTGGAGGCTTCAGTTCAGACGCACCTGCTGCTGCACTCGCGAGCTCACAGATTTCAGCTCCTTGCGAACAGCAGCACAGGTATGTACAACATGATTCA

Function

symbol description
fbln5 Predicted to enable calcium ion binding activity. Predicted to be involved in elastic fiber assembly. Predicted to be located in extracellular space. Is expressed in bulbus arteriosus. Human ortholog(s) of this gene implicated in age related macular degeneration; autosomal dominant cutis laxa 2; autosomal recessive cutis laxa type IA; and cutis laxa. Orthologous to human FBLN5 (fibulin 5).

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K17340 FBLN5; fibulin 5

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_07464278_07478699.mRNA True 1869 mRNA 0.49 11 7464278 7478992

Neighbor

gene id symbol gene type direction distance location
CI01000012_07441851_07459661 TRIP11 coding upstream 4492 7441851 ~ 7459786 (+)
CI01000012_07429147_07434790 GOLGA5 coding upstream 29432 7429147 ~ 7434846 (+)
CI01000012_07409605_07427042 RTF1 coding upstream 36969 7408992 ~ 7427309 (+)
CI01000012_07401962_07405598 NUSAP1 coding upstream 58680 7401962 ~ 7405598 (+)
CI01000012_07359292_07362314 NA coding upstream 101900 7358715 ~ 7362378 (+)
CI01000012_07480048_07492395 NA coding downstream 1056 7480048 ~ 7492766 (+)
CI01000012_07497278_07501713 PLEK2 coding downstream 18238 7497230 ~ 7502298 (+)
CI01000012_07509419_07535325 ZFYVE26 coding downstream 30427 7509419 ~ 7535325 (+)
CI01000012_07548354_07550668 VTI1B coding downstream 69362 7548354 ~ 7551602 (+)
CI01000012_07566408_07581870 RBM25, RBM25A, RBM25B coding downstream 87416 7566408 ~ 7581946 (+)
G73262 NA non-coding upstream 42389 7420693 ~ 7421889 (+)
G73162 NA non-coding upstream 64001 7395368 ~ 7400277 (+)
G73258 NA non-coding upstream 91464 7372589 ~ 7372814 (+)
G73257 NA non-coding upstream 91870 7372072 ~ 7372408 (+)
G73255 NA non-coding upstream 116376 7347650 ~ 7347902 (+)
G73175 NA non-coding downstream 228683 7707675 ~ 7715446 (+)
G73321 NA non-coding downstream 255304 7734296 ~ 7734698 (+)
G73346 NA non-coding downstream 322929 7801921 ~ 7802123 (+)
G73359 NA non-coding downstream 376351 7855343 ~ 7855654 (+)
G73363 NA non-coding downstream 390406 7869398 ~ 7869602 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 1539973 5922385 ~ 5929186 (+)
G71623 NA other upstream 1647673 5813517 ~ 5816605 (+)
G71548 NA other upstream 1902845 5550493 ~ 5561433 (+)
G71221 NA other upstream 1923822 5538525 ~ 5540456 (+)
G71218 NA other upstream 1925894 5535852 ~ 5538384 (+)
CI01000012_07806089_07811902 BEND3 other downstream 327111 7805248 ~ 7811902 (+)
G73578 NA other downstream 887814 8366806 ~ 8367627 (+)
CI01000012_10223957_10235955 NA other downstream 2742963 10223697 ~ 10236276 (+)
G75533 NA other downstream 3665825 11144817 ~ 11145739 (+)
G76385 NA other downstream 5151763 12630755 ~ 12675666 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location