CI01000012_07509419_07535325 (ZFYVE26)


Basic Information

Item Value
gene id CI01000012_07509419_07535325
gene name ZFYVE26
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 7509419 ~ 7535325 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_07509419_07535325.mRNA
ACTGCTTAATTAAACTAAGCGGACTGTCTATCATGCATCCGTTTGGCCGTGAAGAAGAGACCTCCAGGCGGGAGCTCTTCGGTTTCTTCACGCGGTGTTTGCAGCGCGGAGAGTGGGAGCTCGCGGCAGCCTGCGTGTGTCAGCTCGGCGATGAGCGCGGAGATGATCCCCAAATCCCGCAGGACATCGTTAAAGCCATCGTTACTCACCCATATCCGCTCATGTGGGAAACAGTGGGCAGCCCTCACAGATTGGCTTGGTATTGGCTTCAAGTCCTGGAGAAACGTACTAAAATAAAGGTGAGCGGGTCTGTGAAGAGGGAACTGGAGTTCTTGTTGCTCTTAGAGGAACTTGAAGACGTCCCACAGTCTGTACTTAAGGAGCTGCATGAAGCCTTCCTGTACTCTGAGGAAGTAAAGGGAAAGATTCCAGGTGATTCTACTCCTCCACTGAGTGCTGCTGTTCTATCCTGCCTCCGTTCTCTTTTAACCCGCCAGCAGCCGCGGCTCTGCCACTCTCTCATCAGCTTCCTTCAGCACGCGGACCACTCCAGAGACCATGCCTTACAGGACGTCTTCATCCAGCACCTCACCACGAGAGTGAATGTGCCTGTGGAAGAGAGGAACGAGGAATGGGTGGAGCAGGTGTGTGCAGTGCTGGCCTTAGCACCATGGGGGCCAGAGAGGTCAGGTGCTGAGCTAGAGACCCTGTGGAAGGGATTGTGGTCGGCTAGAGAAGGGCTTATGACGGAGGAGAGGATTCTGGGATGTCTACTGAGGCCACAGAGCCAAGCTCTGTTGACTGCATACAGCTCTACTGCACTCAGACTGCTCAAAGAGAAGCTGCTGGAAGAGGCTCCACACACACAGGTTGACTTGCCTGATCTGGAAAGGGTCATGCTTGGCCTGTGCTGTCATGACAACAAGCGTTTGGTGTGGAAAGCCATTTACTTTGAGTGTTTGAGCAGTGGAAAGCACTTTCTTGAGCAGGTCTTGCTTACTGGTTTAGATCTCATAAAGAGGGAGGAATTCTCCAAACTAGAAACACTATTGCAGACTGAGTTTCAGCCTTTGTCCCGACTCTTGTTGTTGCTGGGCTGGATGCATTGTCAAAGCCTGGATTCTGCCAAGTCCCTTCTTAGAGTCCTGCATCACCAACAGCCCCAGACCACTGATTCAGTATTGAGTGAGTTGGCCTGCACTCTGTCCTCTCAACTTGCTGTGCTGGAATGGTGCGATCAGAACAATCCAGGGATATCCCATGATGCCTTGCTGAGTCACTTACACATGCTGGACCATCACTCTGCCCTGTATGTGCTACACTGCCTGATACCTCTTGCCAAGTATGAGGAGCACAAAGTGCTTGAACTGCTGCAAAGAACAGGAGATCCTTCATTAGTGGACTCACCCAGCTGCTCTGTCCAGCGAAACATCACTCTGTTTCAAGGCTTCTGTGCCATGAAGTATGCCCTGTACGCCATCTGCGTGAACGCACACATGCACACCGGCTGCCTGGACTGTGAGCCTCGGCATCAGCAGCAGACAGAGGCGGGTCAGGGGGAGGAGCCACCTGAAGGATGCTCTGATCTGTTTCAGCACTACCTTTCGGAATGTCAGCTGTACCTAGAAGCTGTTCCGCCATTATTTCGTTTGGAGCTCTTGGAGAACATTTTCTCCCTCCTCTTCCTGTCCGACACTGACTTCAGCCCGCAAACAGATCAAGCGAGCACTGCCACAGAAGCCCAACCAGACACTGAGAGAATTAAATCAAACAGTACCAAAGGTGTGAGTACGGCTGAGAGCATCTTAAAAGTAGAAAATGGTGGAAAGGTGGAGGGATTGAAGGTCCAGGATGGAGAGTCTGATCAGATAAACCCTGAACTGGGCCACCTGACATCAGGTTGTCGGGGGTTTCTGGTGGATTTGAGTGTGATGGAGCGGATTCTACGGCTGGTGAGGGAGGGCTTGGAGGGTGTGTGTGGGGTCGGGCAGGAGGACGGCAGGGCGCTTGCAGCCGATGTGGAGTTGGCAGAGAGTCTGGGATGTTCTGTTACCACTGAAACGTTCAGTGCCCGGTTACAGAGATTGTCTAAATACACAGCAGAGGCCCAATGGAGACTGCAGATTGTTACTAGTAACCATGGCAACGGGAATGATGACTTGTACCTCCCATCTCCACTCCCCAGTCCGGCACTTCCTCTGAAGCGCCAGGGTAGCGGCAGCAGCAATTCAGGTGTTCGGAGGAGGAGAAAAAACCACCGGCATCGCTCTGAACGCCACGTCTCATCTGAACGACAAAACGGGGAGGTCAGCACCAGCACCTCAGACGGTGGTGTGTGTGTTGGAGCCACGTGCCGTGGGAGTGAAGTGTGTCCGTGTGGTGGACCTCACAGCTGGCTGGTTCCTGCGATGCTCTCCCCTCCTGAGTCTCTCCTCATCACATGCATTCGCAGAGGCAACTACATAGAAGCCCAGCAGGTGATTGCAATGTATGGTTTGGAGAACTCTGAGTGTGCAGGCGAACTGGTCTTTATGGACCGGTACCGGGAGGTACTGAACGAGCTGGCTCAGGTGGAGCAGAAGATAGAGAGCCAGTCACTTTCTTCATCATCCTCATCTTCAGAGGGTCTGGTCACAGTGGGTGTTGTTCCAGGGGGAAGGACCAGAATGGGTAGTAGCAGCAGATTAACACTCAAGAGTATTGGGAGTGCAGCAGCCGCAGGCGTGGCTTTTTATTCCATTTCTGATGTGGCTGATCGTTTACTTAGTACCCCGAGCAGGGCGATACCCTGTTTAGAGGACAGCTACTGGCTCTCCCAGTGCTCTATAGACTCCCCAGACCTTGTGCGACCCCTGGTGGAAGAGTTGAGCCCTGCAGCTATGGCAGCCTTTGACCTCGCCTGCTGTCAGTGCCAACTGTGGAAAACGTCGCGGCAGCTGCTTGAGACTGCAGAGAGAAGACTCAGCAGCTTTCTGGAGGCCAGAGGTGTACGAGTTGATGCAAAGGTTCCTCACGCCAACGGTATTAGAGGCTTCCCTTCAGTACTACAACAAATCAGCAAGGTCCTTAACAGAACCTCCGTCAGCAAAGGCACAAACTGTAATGGAGAGGAGAATGCTGTTTACAGCCCCTTTGGCTGTAGTGCCCAGGAAGTGCTGCTGTCTTGTCATTCAACATTAACAGAAGAGAGTATCGCCTCCCGTCTAAACCTGAATCAGCGCTTAGAGGTCACACTTCAAACCCTGACCTCTGCCACCAACACCTCAGTAGACGCTTTGACGGGGAGCTCTCTCCTGACAGCGCTGGCCGAACAGGCTGGTCTCAAGCAGTCTGAACTGGATTCCCACCCGGTACGAACTGCTATGAAACAACTCCTACACTATCTGGACCAGCTCTGCCCGTTTGAGCCTGACAGTGCCCCTGGCAGGCCAGATTACATACGCAACTTCCTTGATTACGTCAACGTGTTGGCTTCAGTACTGGTGCGCAGTTTGTGGTCAGAGGATCAGTCCATGGAGGTGAAATTGGGAAATCCTCTTTTACTGTTGCTTCAGTCGCCTACCCAGCTCCTCTCTCTCCTTCTGTTTGACAGACAGGTGTCACCTGACAGGGTTCTTTCTCTCTTGCAGCAGGAGCAGTTGCGTTTGAGTGTGCAGCAGGTTGTAGTTCAGCGCTGTTGTGAAACTCTCCCTCTCTGGGATTCTAGGGCTATGACATTTTCTCAAGGGCAACCGAGGATCGCAGGGTTCAACAGTGGGGCATTCTGCCCGGCCAGCATCGCCTCAATTTTCCAGCAGCACGCTCAGGAGTGCGCCCCTTCCCTTGACCTCTCTGACCTTGCCACAATCTCTGACCCCAGCTCTGAGTCTGAGGTCTCAGTGGAGGACACATCTTCTACATCCACCAACCTCTCCACCTCTCCACCCTCGCCATCTTCAAGTCCTCCTTCTTCTTTTCTCCTCACTCCTTCTGCACTGTCTTTTCTGAAGTCCCGTTCCCCCCTTGTTGCCGCCCTGGCATGCCTCAGCGCCAGTCGGGGTGGCGTGATCCGGGCAACTTCCTCTGGCTGGTCAGGCTTACCTTCATATTTTCGCGGATCTGGGCGTAAAGAGGCAGTTTTGGATGGAGACCAGATCTCAAGAGAAGGGGAAGCTCTGCTTAAAAACTTCCCTATCCTGAGAATGTACCTGCGGTCCATGGCTGAGCCAGTTCTGGGGGTCTCGTTGGAAGCAGAAGAAGGTCTTGGGCTGAATCTCTGTGGGAAGCCTGTGGTGGGAATGCTGTTTTCTGGCCTGCAGGGAAGTGCAGCGCAAGCAATGGCTGCTGAAGCATTCCAGCAATCCCTAAACGCTGGCGATCTGAACAGAGCCTTAGAGCTCCTAGAGCTTTATGCACAACCGTGCAGCCAGGAGGGGGCACTCCGGGACAAACTACTGGCATGCACTGCTCTGCAAGAAAGCAGCAGTGTGGAGCAGTTGTTTCGTGTAAGGGACTGGGAGCTGCGTGGACGTGTGGTTCTGCAGGGTTTGGACCGCTGGCCTTTACAACACTGTTTAGAGTTGCTGCAGTTCTGTCTCAGCGACCAGAACACCCAGGATCCTCTCAGAGATCAGCTTCAGCAGAGGAAACAGGAGCTGGACATGTACCAGCGGATGCTGAGTTTGCAGCCTCCGTTGCCATGTGAGACGTGGCAGGAGTTGAGGGAGGAGTCTACGAAGAATCCTGAACCTCTATTCAATCTAATGCTGGAGGCCAGGGAGTTTGAGTTGTGTGGTCAGTGGGTGCAGCTGTATTCAGTTTCTGATCAGTCTCGAATGCAGCTGCAGACCGAACACCTGCTATACCTCCTAGAACAGAATTACACAGAAGATGCTTTCCAGCTTTTGGAAGCTCTTTCTGATTCGATGGGTTTGGAGGTTAGTGAGCAAGCTCTGGATCGAAGACCTGGATTGGCTGCCTGCCATTTCCTGTCAGATTACCTCACCCTACACTTTCAGAGTCAGATGACACTTGCTCGGAGACGCCACATACATGCCCTGCACCTTGGCTCGAAGGTTCTACTGACTTTGCCGGAAGCATCTCGTCAGGATTATTTTTCACTGCTGTCTGATCCACTGCTCATGCTGGAGCAGCTACTGATGAATCTGAAGGTAGACTGGGCCACCGTTGCCATCAGCACTCTACGGAGCCTTCTGCCGGCTCAAGACGCTGGTATCACCAACCAACACATTGACACCCTACTTGCAGATTACGCCCGGAAGGCTCTTGATTTTCCTTATGCACCCAGAGAGTGGTCACGTTCTGACTCTGTCATTAGTCTGCAGGATGCATTTCTGCAGTGTCCAGCCCAGGAGAGCTGCCCATCTTCTCCAAGCCACACCCCTCCTCCATCAGCAGGCAGCACACCCATGCACACACCCTCCAGTGATAGACGCCCCAGTGGGAAAAGGATCCGGCAGCTGGCCACACCTTTCACCCCTCCGGAGAAAACCCCTGACCGCAAGGACTGGATCCCAGACCACAAACAGCACATCTGTATGGTCTGCCAGAGGGAGAGATTCACCATGTTTAACAGACGGCATCACTGCAGACGCTGTGGCAGGCTGGTGTGTCATTCCTGCTCCAGCAGGAAGATGGCTGTAGAGGGCTCTGAAGAGCCTGTCAGAGTCTGTGACCAATGCTACAACTTCTTCCACACAGACTCAGATGAGGAGCTTGATCAGGGGGAAGCTGGCAGCCCTGCGTCCATTGATGGAGTCCTGAATGGGGTTCTCAGTCTGCCTGAGGTTCCACGAAAGCAGTATCGCCTGAGTCCAAACCCAGCAGAGAACCAGCAGCTGAAGAGCGAGTTCTACTATGAACAGGCACCCAGCGCATCCCTATGTGTTGCTATACTGACACTACACAGTGATCACGCAGCCTGCGGGCAGCAGTTGATTGGCCACTGCCGCTTACTCTCACGCAAACTGACCAATCCTGAGGTGGATGCTCGTCTGCTGACAGATGTGATGCGGCAGCTGCTGTTCAGTGCCAAACTCATGTTTGTAAACGCAGGATGCACCCAAGAGCCGGCACTCTGCGACAGCTACATCAGTAAGGTGGATGTGTTAAAGATTCTGGTCAGTGCAAACTACAAATACATTCCATCTCTGGACGATATTCAGGAAACGACTGCAGTGACGCGCCTGCGCAACCAGCTGCTAGAGGCCGAGCACTACCAGCTGGCCGTGGAGGTGTCGACTAAGAGTGGACTGGACCCGAACGGAGTTTGGCAGGCGTGGGGTATGGCGTCTTTGAAGGCTGGAAATCTGAGCGGGGCCAGAGAGAAGTTTGCCCGCTGTCTAAAAGCACCAGTAGATCGAAACCAGCTAAACCATGGAGTGAGACTTCTGCAGGAGATTGTTCAGCACCTGGAGTCCACAGTCAAACCTACTCTAAGCACGACGGTGGATGAGGATATCTTGGCCTCTTTGCGTGAGCTGGAAGAGGCTCTCTCTGATTCTGCCCCTCCAGATGCCACAGAGAGCAGAGTTCAGCGGTCCGCCTACTATCAGGAGTGCCTGTTTTACCTGCTCACTTACGGCACACACTTGAGCCTCATCAGCTTTTACCTGCGCCACGACTGTCTGAAAGACGCACTCACCCACAAGTGTTCAGAGGATGTGTTTCTGGAGGGCATCTTTCAGCCCTGTCTTGAACGTGGGCGGTTGGGAACTTTGCAGGGTCTGTTAGAAACTCTGGACCCCACACTGGAGACCTGGGGCTGTTACCTTCTTTCAGCCTGTCAGTTACTGCAGCGCAGGGGACACTACCACACTCTGTACCAACTCCAACAGTTCATGATGGATCACGTTCGCGCCGCTATGACGTGCATTCGCTTCTTTTCTCATGGTGCTCGGTCCTACCTGCAGCTGGGAGAACAGCAGCGCTGGCTGATCCGAGCCAAAGAGCACCTGAGAACTTACCTACAGGAACAGCAGAGCCGCAGGAAATCACATAGCTCCTCTTTCAGGAAGAAAATGAGCTCCACTGATGTCTCAAGACACGTCCACACAATCGAGCTGCAGTTGGAAGTGACACGGTTCTTACACCGCTGTGAAAGCTCACCATCCAAGACAGCTTTAGGCCCCACCCCCACAGGGAACAGTGGCCCACCCACTCTGTTTGGAAACAGCCCCATGAAGGTGGATGTGGCCTGCAAGGCGATGCTGGGAGGAAAGAACATTGAGGAAGGTTTTGGCATTGCATATCGAGTAATACAGGACTTCCAGCTGGAGGCACTGGCAGTGTACATACGGGTTGGACAGCGCCTGGTCCGGCAGCGCCAGTACTCGTCTGTGCGGCAGCTGCTGAAGTGTGTAGGGGAGTCTGGAACGGCCTCTAAACACGACTGTGACGCCATTGTGCTCAGCTGTGTCTCTGTGGCTGATAAGAGTCCTGCAGAT

Function

symbol description
zfyve26 Predicted to enable phosphatidylinositol-3-phosphate binding activity. Acts upstream of or within axonogenesis and oocyte development. Predicted to be active in centrosome and midbody. Is expressed in fertilized egg; nervous system; oocyte; and somatic cell. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 15. Orthologous to human ZFYVE26 (zinc finger FYVE-type containing 26).

GO:

id name namespace
GO:0000910 cytokinesis biological_process

KEGG:

id description
K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_07509419_07535325.mRNA True 7445 mRNA 0.53 38 7509419 7535325

Neighbor

gene id symbol gene type direction distance location
CI01000012_07497278_07501713 PLEK2 coding upstream 7121 7497230 ~ 7502298 (+)
CI01000012_07480048_07492395 NA coding upstream 16653 7480048 ~ 7492766 (+)
CI01000012_07464278_07478699 FBLN5 coding upstream 30427 7464278 ~ 7478992 (+)
CI01000012_07441851_07459661 TRIP11 coding upstream 49633 7441851 ~ 7459786 (+)
CI01000012_07429147_07434790 GOLGA5 coding upstream 74573 7429147 ~ 7434846 (+)
CI01000012_07548354_07550668 VTI1B coding downstream 13029 7548354 ~ 7551602 (+)
CI01000012_07566408_07581870 RBM25, RBM25A, RBM25B coding downstream 31083 7566408 ~ 7581946 (+)
CI01000012_07584742_07586196 KCNF1B, KCNF1 coding downstream 49417 7584742 ~ 7586372 (+)
CI01000012_07645586_07647322 NA coding downstream 108355 7643680 ~ 7647962 (+)
CI01000012_07678377_07700760 ROCK2A, ROCK2 coding downstream 143052 7678377 ~ 7702194 (+)
G73262 NA non-coding upstream 87530 7420693 ~ 7421889 (+)
G73162 NA non-coding upstream 109142 7395368 ~ 7400277 (+)
G73258 NA non-coding upstream 136605 7372589 ~ 7372814 (+)
G73257 NA non-coding upstream 137011 7372072 ~ 7372408 (+)
G73255 NA non-coding upstream 161517 7347650 ~ 7347902 (+)
G73175 NA non-coding downstream 172350 7707675 ~ 7715446 (+)
G73321 NA non-coding downstream 198971 7734296 ~ 7734698 (+)
G73346 NA non-coding downstream 266596 7801921 ~ 7802123 (+)
G73359 NA non-coding downstream 320018 7855343 ~ 7855654 (+)
G73363 NA non-coding downstream 334073 7869398 ~ 7869602 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 1585114 5922385 ~ 5929186 (+)
G71623 NA other upstream 1692814 5813517 ~ 5816605 (+)
G71548 NA other upstream 1947986 5550493 ~ 5561433 (+)
G71221 NA other upstream 1968963 5538525 ~ 5540456 (+)
G71218 NA other upstream 1971035 5535852 ~ 5538384 (+)
CI01000012_07806089_07811902 BEND3 other downstream 270778 7805248 ~ 7811902 (+)
G73578 NA other downstream 831481 8366806 ~ 8367627 (+)
CI01000012_10223957_10235955 NA other downstream 2686630 10223697 ~ 10236276 (+)
G75533 NA other downstream 3609492 11144817 ~ 11145739 (+)
G76385 NA other downstream 5095430 12630755 ~ 12675666 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00000300 NA misc CM030141.1 CM030141.1 10029727 ~ 10059000 (-)