G186685


Basic Information

Item Value
gene id G186685
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 1555172 ~ 1555452 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU253155
aaaacagtaaacaaaacgcgggtaacgcaaaaaactCAGAACTAAGAAAACTATGAACAAAACTAGgtgtaactaaataaataaaacacagaataactataataacactAGAAACATATAATTAACAAACTTTGTAAACTAACTCAGATAACAAAACAGACCTGGATTCAGGGACCACAGAACACAAAACTAGAGTACACGGAAGacaaagatacaaaagactcgacactgcacattcaaacagaggggcttatatacacgagGAGattgagaaacacctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253155 True 281 lncRNA 0.35 1 1555172 1555452

Neighbor

gene id symbol gene type direction distance location
rbm15b rbm15b coding upstream 176614 1371719 ~ 1378558 (+)
manf manf,LOC107691893,LOC107567190,LOC107592842,LOC107677041,LOC107750980 coding upstream 186912 1362651 ~ 1368260 (+)
dock3 dock3 coding upstream 196799 1146452 ~ 1358373 (+)
LOC103033204 LOC108436691,LOC108255172,LOC107571036,LOC107557964,LOC793844 coding upstream 417486 1055651 ~ 1137686 (+)
LOC103033530 LOC108436692 coding upstream 502356 1040122 ~ 1052816 (+)
dag1 dag1,LOC108415278,LOC107691879,LOC108415277 coding downstream 346186 1901638 ~ 1956628 (+)
nicn1 nicn1 coding downstream 490196 2045648 ~ 2055723 (+)
amigo3 amigo3 coding downstream 1274743 2830195 ~ 2851261 (+)
ccdc66 NA coding downstream 1517674 3073126 ~ 3092141 (+)
atp6ap1l atp6ap1l,LOC108254970 coding downstream 1843888 3399340 ~ 3414065 (+)
G186637 pcbp4,LOC108436686 non-coding upstream 142861 1409123 ~ 1412311 (+)
G186642 NA non-coding upstream 158529 1395413 ~ 1396643 (+)
G186641 NA non-coding upstream 164689 1389925 ~ 1390483 (+)
G186457 NA non-coding upstream 414567 1123546 ~ 1140605 (+)
G186458 NA non-coding upstream 460579 1087883 ~ 1094593 (+)
G186686 NA non-coding downstream 73406 1628858 ~ 1629351 (+)
G186700 NA non-coding downstream 243359 1798811 ~ 1799055 (+)
G186701 NA non-coding downstream 245023 1800475 ~ 1800692 (+)
G186704 NA non-coding downstream 275378 1830830 ~ 1831103 (+)
G186705 NA non-coding downstream 276523 1831975 ~ 1832318 (+)
podxl2 NA other upstream 459835 606833 ~ 1095337 (+)
cers5 cers5,LOC107698577,LOC107590873,LOC107694004,LOC107718462 other upstream 1016956 510575 ~ 538216 (+)
G186231 NA other upstream 1440085 107396 ~ 115087 (+)
G186880 lmcd1 other downstream 1425045 2980497 ~ 3002015 (+)
G186978 rps23,rs23,LOC106566095,LOC106566598 other downstream 1836935 3392387 ~ 3394843 (+)
p3h1 NA other downstream 4224439 5779891 ~ 5798979 (+)
LOC103029365 NA other downstream 5521713 7077165 ~ 7098672 (+)
trnaq-uug_4 NA other downstream 5636702 7192154 ~ 7192226 (+)

Expression


Co-expression Network