znf76 (znf76)


Basic Information

Item Value
gene id znf76
gene name znf76
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 17608791 ~ 17619936 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007256715.3
tgtgtgtgtgtgtcagtcagtcagtcagtcagtgctgTGACTGAACTCATCCATGTTCCGGGGCTCATGGCGgtaGAGTGTTTACTCCGGCAGTAGGATGGAGAGTTTGGGGCTGCAGGCTGTAGCTCTGAGTGATGGCTCCACCGCCTACGTCCAACAGGCCATTAATGACAGTAACCTGGTTGAAGGAGACACCATCCAGCTGGAGGATGGAACCACAGCCTATATCCAGCAGGTCACCTTGCAGAAAGaCGCTCTGCCGTTTGAAGATGGTCAGGTGGTCCAGCTTGAGGATGGCACCACAGCCTACATACACCGCACACCTAAAGATGGCTTCGACTCTGGTGCGGTGGAAGCAGTGCAGCTGGAGGATGGAAGCACGGCGTATATACACCACCCATCATCCCTGCAGACAGGGGGCACTATACTCACTGTACAGGCTGGGGGTGCACTGGAGGAGCTCACAGCGGACCCTGACACCCTCAGCACTCTGGAGACGTACGCAGCACGGCTGACAGGCTCTAAGATAGAGATGGATGGGAACGGTGTTGGTGCTAATGGAGTAAAACAGGCCACGGTGCAGctgATGCTGGAGGGGAAAGTGTGGGGGTCCAGTAAAACTCCTCAGGGGGAGAAAAGCTTCCAATGCAGCTACGAGGGCTGCGGCCGACTCTACACTACTGCGCACCATTTAAAGGTGCACGAGCGTTCTCACACAGGTGACCGGCCGTACCGCTGTGAGATTCCCACCTGCACTAAAGCCTTCTCCACCGGATACGGCCTGAAGAGCCACCTGCGCACACACACCGGAGAGAAGCCCTACAAGTGTCCTGAGGACATGTGCTACAAAGCCTTTAAAACCTCAGGAGACCTGCAGAAACACGTCCGCACACACACTGggGAGAAGCCATTTAAGTGTCCGTTTGAGGGCTGTGGGCGCTCCTTCACCACCTCCAACATCAGGAAGgtgcacatgcgcacacacacaggtgagagacCGTACCTGTGTCCAGAGCCAGCATGCGGACGGGGCTTTGCCAGCGCCACCAACTACAAAAACCACATGAGGATACACACAGGAGAGAAGCCGTATCTGTGTACAGTTCCTGGCTGTGGGAAGCGTTTTACAGAATACTCCAGTCTGTATAAACACCACGTTgtgcacacacactgtaaaccctaCAGCTGCACACACTGCGGGAAAACCTACAGACAGACCTCCACCCTCGCCATGCATACACGCACCGCACACGGAGAAGaGACAGAAGGGATGGAATCCTCTCAGCACCAGCAGAGTGTGTATGCAGAGGGGGCGGAGCAGAAGGAGGAGTCTCAGGCTTCCATGGAGTCTGAGGATGTCATTGGCACTCATgTGGATCTGACCGTCGATGAGCTGCATGCTCTCACTGCTGGCATCACCATGGTAACACAAGACGGCACCACCATCACCGTCCCCGCCCACCAGAACATCATGAGCGGCAGGCAGCAACACGTTGCCATGGTTACGCAAGACGGcaaagagctgcagcagGTTGCTATCGTTACATCAGATGCCATCATGCCAGTCGGATCAGAAATGAGTTCTCCTCAGTGTCAGCAGGTGGCGCTGTTGGCCACAGCAAACGGCACGCAGATAGCAGTACAGCTGGAGGAGCAGCAAACATTAGAAGAAGCAATCAGCATGGCCACTGccacaatacagcagggactgACCCAGGATCAGCCAGATCCCTGACCCAAGCACCTTCTAAAACATCAGTGTTCCACAGATCTGACCCAGAATCAGCCTTTAACCTGACCACAGCACCTGCAGAAACAACAGAATCTACATATCTGACCCAGGATCAGCCTCAACCCCAATCCAAGCACCTGCAGAAACAACATAATCTACAGATCTGACCCAGGATCAGCATTTAAATCTGACCACAGCATCTGCAGAATAAACATTAACTAAAAATCTGACCTAGGATCAGCCTCAAACCCAATCCAAGAATctacaaaaacaacagaatCTATAAATCTGACCCAGGATCAGCCTCAAAGTTGACCACAGCACCTACAGAAACATCATTATCTAAAGATCTGACCCAGGATCAGCTTTAAACCTGACCACAGCATCTACAGAAACAGCATTATCTAAATATCTGACCCAGAATCAGCCTCAAACCTGACCACAGCATCTACAAATCAACAACAGAATCCACAGATCTGACCCAG
>XM_007256716.3
catatttgtaatgtgtgacagcgtcCTGAATCATAACTACATTTCTGCCATTTGTAAgaaaccaaaccgtgtgaatTGTGATTATTCTCATTAAGCAcataactgttattaaaaataaacaaatgaatctGAACTTTTTAagcatgtatttttgttttagaagTGTATTTTTGGTATTACTTCATGGgattaaaaaatactgaaactGAGATATCACCTTTCAgctaaaaaatatgagtttattatatattagatttgattcatatcacccagccctaaaATAGACCTAAAATAGTGCCTAAAAAGTGACATATACACAGTGGCCCCTACACCCAGAAGGGAGCACTTTTGGAATACAGATTATACTGAACccaaatatgtataaaatgctACACGGATGGGCTCTGCATATAATGgtaGAGTGTTTACTCCGGCAGTAGGATGGAGAGTTTGGGGCTGCAGGCTGTAGCTCTGAGTGATGGCTCCACCGCCTACGTCCAACAGGCCATTAATGACAGTAACCTGGTTGAAGGAGACACCATCCAGCTGGAGGATGGAACCACAGCCTATATCCAGCAGGTCACCTTGCAGAAAGaCGCTCTGCCGTTTGAAGATGGTCAGGTGGTCCAGCTTGAGGATGGCACCACAGCCTACATACACCGCACACCTAAAGATGGCTTCGACTCTGGTGCGGTGGAAGCAGTGCAGCTGGAGGATGGAAGCACGGCGTATATACACCACCCATCATCCCTGCAGACAGGGGGCACTATACTCACTGTACAGGCTGGGGGTGCACTGGAGGAGCTCACAGCGGACCCTGACACCCTCAGCACTCTGGAGACGTACGCAGCACGGCTGACAGGCTCTAAGATAGAGATGGATGGGAACGGTGTTGGTGCTAATGGAGTAAAACAGGCCACGGTGCAGctgATGCTGGAGGGGAAAGTGTGGGGGTCCAGTAAAACTCCTCAGGGGGAGAAAAGCTTCCAATGCAGCTACGAGGGCTGCGGCCGACTCTACACTACTGCGCACCATTTAAAGGTGCACGAGCGTTCTCACACAGGTGACCGGCCGTACCGCTGTGAGATTCCCACCTGCACTAAAGCCTTCTCCACCGGATACGGCCTGAAGAGCCACCTGCGCACACACACCGGAGAGAAGCCCTACAAGTGTCCTGAGGACATGTGCTACAAAGCCTTTAAAACCTCAGGAGACCTGCAGAAACACGTCCGCACACACACTGggGAGAAGCCATTTAAGTGTCCGTTTGAGGGCTGTGGGCGCTCCTTCACCACCTCCAACATCAGGAAGgtgcacatgcgcacacacacaggtgagagacCGTACCTGTGTCCAGAGCCAGCATGCGGACGGGGCTTTGCCAGCGCCACCAACTACAAAAACCACATGAGGATACACACAGGAGAGAAGCCGTATCTGTGTACAGTTCCTGGCTGTGGGAAGCGTTTTACAGAATACTCCAGTCTGTATAAACACCACGTTgtgcacacacactgtaaaccctaCAGCTGCACACACTGCGGGAAAACCTACAGACAGACCTCCACCCTCGCCATGCATACACGCACCGCACACGGAGAAGaGACAGAAGGGATGGAATCCTCTCAGCACCAGCAGAGTGTGTATGCAGAGGGGGCGGAGCAGAAGGAGGAGTCTCAGGCTTCCATGGAGTCTGAGGATGTCATTGGCACTCATgTGGATCTGACCGTCGATGAGCTGCATGCTCTCACTGCTGGCATCACCATGGTAACACAAGACGGCACCACCATCACCGTCCCCGCCCACCAGAACATCATGAGCGGCAGGCAGCAACACGTTGCCATGGTTACGCAAGACGGcaaagagctgcagcagGTTGCTATCGTTACATCAGATGCCATCATGCCAGTCGGATCAGAAATGAGTTCTCCTCAGTGTCAGCAGGTGGCGCTGTTGGCCACAGCAAACGGCACGCAGATAGCAGTACAGCTGGAGGAGCAGCAAACATTAGAAGAAGCAATCAGCATGGCCACTGccacaatacagcagggactgACCCAGGATCAGCCAGATCCCTGACCCAAGCACCTTCTAAAACATCAGTGTTCCACAGATCTGACCCAGAATCAGCCTTTAACCTGACCACAGCACCTGCAGAAACAACAGAATCTACATATCTGACCCAGGATCAGCCTCAACCCCAATCCAAGCACCTGCAGAAACAACATAATCTACAGATCTGACCCAGGATCAGCATTTAAATCTGACCACAGCATCTGCAGAATAAACATTAACTAAAAATCTGACCTAGGATCAGCCTCAAACCCAATCCAAGAATctacaaaaacaacagaatCTATAAATCTGACCCAGGATCAGCCTCAAAGTTGACCACAGCACCTACAGAAACATCATTATCTAAAGATCTGACCCAGGATCAGCTTTAAACCTGACCACAGCATCTACAGAAACAGCATTATCTAAATATCTGACCCAGAATCAGCCTCAAACCTGACCACAGCATCTACAAATCAACAACAGAATCCACAGATCTGACCCAG
>XM_022682504.1
tgtgtgtgtgtgtcagtcagtcagtcagtcagtgctgTGACTGAACTCATCCATGTTCCGGGGCTCATGGCGgtaGAGTGTTTACTCCGGCAGTAGGATGGAGAGTTTGGGGCTGCAGGCTGTAGCTCTGAGTGATGGCTCCACCGCCTACGTCCAACAGGCCATTAATGGTGACGCACTGCATTGCTGTTCTCTCTGTCTTAGACAGTAACCTGGTTGAAGGAGACACCATCCAGCTGGAGGATGGAACCACAGCCTATATCCAGCAGGTCACCTTGCAGAAAGaCGCTCTGCCGTTTGAAGATGGTCAGGTGGTCCAGCTTGAGGATGGCACCACAGCCTACATACACCGCACACCTAAAGATGGCTTCGACTCTGGTGCGGTGGAAGCAGTGCAGCTGGAGGATGGAAGCACGGCGTATATACACCACCCATCATCCCTGCAGACAGGGGGCACTATACTCACTGTACAGGCTGGGGGTGCACTGGAGGAGCTCACAGCGGACCCTGACACCCTCAGCACTCTGGAGACGTACGCAGCACGGCTGACAGGCTCTAAGATAGAGATGGATGGGAACGGTGTTGGTGCTAATGGAGTAAAACAGGCCACGGTGCAGctgATGCTGGAGGGGAAAGTGTGGGGGTCCAGTAAAACTCCTCAGGGGGAGAAAAGCTTCCAATGCAGCTACGAGGGCTGCGGCCGACTCTACACTACTGCGCACCATTTAAAGGTGCACGAGCGTTCTCACACAGGTGACCGGCCGTACCGCTGTGAGATTCCCACCTGCACTAAAGCCTTCTCCACCGGATACGGCCTGAAGAGCCACCTGCGCACACACACCGGAGAGAAGCCCTACAAGTGTCCTGAGGACATGTGCTACAAAGCCTTTAAAACCTCAGGAGACCTGCAGAAACACGTCCGCACACACACTGggGAGAAGCCATTTAAGTGTCCGTTTGAGGGCTGTGGGCGCTCCTTCACCACCTCCAACATCAGGAAGgtgcacatgcgcacacacacaggtgagagacCGTACCTGTGTCCAGAGCCAGCATGCGGACGGGGCTTTGCCAGCGCCACCAACTACAAAAACCACATGAGGATACACACAGGAGAGAAGCCGTATCTGTGTACAGTTCCTGGCTGTGGGAAGCGTTTTACAGAATACTCCAGTCTGTATAAACACCACGTTgtgcacacacactgtaaaccctaCAGCTGCACACACTGCGGGAAAACCTACAGACAGACCTCCACCCTCGCCATGCATACACGCACCGCACACGGAGAAGaGACAGAAGGGATGGAATCCTCTCAGCACCAGCAGAGTGTGTATGCAGAGGGGGCGGAGCAGAAGGAGGAGTCTCAGGCTTCCATGGAGTCTGAGGATGTCATTGGCACTCATgTGGATCTGACCGTCGATGAGCTGCATGCTCTCACTGCTGGCATCACCATGGTAACACAAGACGGCACCACCATCACCGTCCCCGCCCACCAGAACATCATGAGCGGCAGGCAGCAACACGTTGCCATGGTTACGCAAGACGGcaaagagctgcagcagGTTGCTATCGTTACATCAGATGCCATCATGCCAGTCGGATCAGAAATGAGTTCTCCTCAGTGTCAGCAGGTGGCGCTGTTGGCCACAGCAAACGGCACGCAGATAGCAGTACAGCTGGAGGAGCAGCAAACATTAGAAGAAGCAATCAGCATGGCCACTGccacaatacagcagggactgACCCAGGATCAGCCAGATCCCTGACCCAAGCACCTTCTAAAACATCAGTGTTCCACAGATCTGACCCAGAATCAGCCTTTAACCTGACCACAGCACCTGCAGAAACAACAGAATCTACATATCTGACCCAGGATCAGCCTCAACCCCAATCCAAGCACCTGCAGAAACAACATAATCTACAGATCTGACCCAGGATCAGCATTTAAATCTGACCACAGCATCTGCAGAATAAACATTAACTAAAAATCTGACCTAGGATCAGCCTCAAACCCAATCCAAGAATctacaaaaacaacagaatCTATAAATCTGACCCAGGATCAGCCTCAAAGTTGACCACAGCACCTACAGAAACATCATTATCTAAAGATCTGACCCAGGATCAGCTTTAAACCTGACCACAGCATCTACAGAAACAGCATTATCTAAATATCTGACCCAGAATCAGCCTCAAACCTGACCACAGCATCTACAAATCAACAACAGAATCCACAGATCTGACCCAG
>XM_022682505.1
acatatttgtaatgtgtgacagcgtcCTGAATCATAACTACATTTCTGCCATTTGTAAgaaaccaaaccgtgtgaatTGTGATTATTCTCATTAAGCAcataactgttattaaaaataaacaaatgaatctGAACTTTTTAagcatgtatttttgttttagaagTGTATTTTTGGTATTACTTCATGGgattaaaaaatactgaaactGAGATATCACCTTTCAgctaaaaaatatgagtttattatatattagatttgattcatatcacccagccctaaaATAGACCTAAAATAGTGCCTAAAAAGTGACATATACACAGTGGCCCCTACACCCAGAAGGGAGCACTTTTGGAATACAGATTATACTGAACccaaatatgtataaaatgctACACGGATGGGCTCTGCATATAATGgtaGAGTGTTTACTCCGGCAGTAGGATGGAGAGTTTGGGGCTGCAGGCTGTAGCTCTGAGTGATGGCTCCACCGCCTACGTCCAACAGGCCATTAATGGTGACGCACTGCATTGCTGTTCTCTCTGTCTTAGACAGTAACCTGGTTGAAGGAGACACCATCCAGCTGGAGGATGGAACCACAGCCTATATCCAGCAGGTCACCTTGCAGAAAGaCGCTCTGCCGTTTGAAGATGGTCAGGTGGTCCAGCTTGAGGATGGCACCACAGCCTACATACACCGCACACCTAAAGATGGCTTCGACTCTGGTGCGGTGGAAGCAGTGCAGCTGGAGGATGGAAGCACGGCGTATATACACCACCCATCATCCCTGCAGACAGGGGGCACTATACTCACTGTACAGGCTGGGGGTGCACTGGAGGAGCTCACAGCGGACCCTGACACCCTCAGCACTCTGGAGACGTACGCAGCACGGCTGACAGGCTCTAAGATAGAGATGGATGGGAACGGTGTTGGTGCTAATGGAGTAAAACAGGCCACGGTGCAGctgATGCTGGAGGGGAAAGTGTGGGGGTCCAGTAAAACTCCTCAGGGGGAGAAAAGCTTCCAATGCAGCTACGAGGGCTGCGGCCGACTCTACACTACTGCGCACCATTTAAAGGTGCACGAGCGTTCTCACACAGGTGACCGGCCGTACCGCTGTGAGATTCCCACCTGCACTAAAGCCTTCTCCACCGGATACGGCCTGAAGAGCCACCTGCGCACACACACCGGAGAGAAGCCCTACAAGTGTCCTGAGGACATGTGCTACAAAGCCTTTAAAACCTCAGGAGACCTGCAGAAACACGTCCGCACACACACTGggGAGAAGCCATTTAAGTGTCCGTTTGAGGGCTGTGGGCGCTCCTTCACCACCTCCAACATCAGGAAGgtgcacatgcgcacacacacaggtgagagacCGTACCTGTGTCCAGAGCCAGCATGCGGACGGGGCTTTGCCAGCGCCACCAACTACAAAAACCACATGAGGATACACACAGGAGAGAAGCCGTATCTGTGTACAGTTCCTGGCTGTGGGAAGCGTTTTACAGAATACTCCAGTCTGTATAAACACCACGTTgtgcacacacactgtaaaccctaCAGCTGCACACACTGCGGGAAAACCTACAGACAGACCTCCACCCTCGCCATGCATACACGCACCGCACACGGAGAAGaGACAGAAGGGATGGAATCCTCTCAGCACCAGCAGAGTGTGTATGCAGAGGGGGCGGAGCAGAAGGAGGAGTCTCAGGCTTCCATGGAGTCTGAGGATGTCATTGGCACTCATgTGGATCTGACCGTCGATGAGCTGCATGCTCTCACTGCTGGCATCACCATGGTAACACAAGACGGCACCACCATCACCGTCCCCGCCCACCAGAACATCATGAGCGGCAGGCAGCAACACGTTGCCATGGTTACGCAAGACGGcaaagagctgcagcagGTTGCTATCGTTACATCAGATGCCATCATGCCAGTCGGATCAGAAATGAGTTCTCCTCAGTGTCAGCAGGTGGCGCTGTTGGCCACAGCAAACGGCACGCAGATAGCAGTACAGCTGGAGGAGCAGCAAACATTAGAAGAAGCAATCAGCATGGCCACTGccacaatacagcagggactgACCCAGGATCAGCCAGATCCCTGACCCAAGCACCTTCTAAAACATCAGTGTTCCACAGATCTGACCCAGAATCAGCCTTTAACCTGACCACAGCACCTGCAGAAACAACAGAATCTACATATCTGACCCAGGATCAGCCTCAACCCCAATCCAAGCACCTGCAGAAACAACATAATCTACAGATCTGACCCAGGATCAGCATTTAAATCTGACCACAGCATCTGCAGAATAAACATTAACTAAAAATCTGACCTAGGATCAGCCTCAAACCCAATCCAAGAATctacaaaaacaacagaatCTATAAATCTGACCCAGGATCAGCCTCAAAGTTGACCACAGCACCTACAGAAACATCATTATCTAAAGATCTGACCCAGGATCAGCTTTAAACCTGACCACAGCATCTACAGAAACAGCATTATCTAAATATCTGACCCAGAATCAGCCTCAAACCTGACCACAGCATCTACAAATCAACAACAGAATCCACAGATCTGACCCAG

Function

symbol description
znf76 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Is expressed in eye; gut; hindbrain; midbrain hindbrain boundary; and trigeminal placode. Orthologous to human ZNF76 (zinc finger protein 76).

NR:

description
zinc finger protein 76

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K20828 ZNF143_76, STAF; zinc finger protein 143/76

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007256715.3 False 2217 mRNA 0.53 14 17608791 17619936
XM_007256716.3 False 2561 mRNA 0.49 14 17608791 17618817
XM_022682504.1 False 2251 mRNA 0.53 14 17608791 17619936
XM_022682505.1 True 2596 mRNA 0.49 14 17608791 17618818

Neighbor

gene id symbol gene type direction distance location
LOC103024167 NA coding downstream 34134 17554248 ~ 17574657 (-)
LOC103034515 LOC108413010 coding downstream 73002 17516888 ~ 17535789 (-)
LOC111195393 NA coding downstream 115585 17483806 ~ 17493206 (-)
LOC103035164 NA coding downstream 130622 17468975 ~ 17478169 (-)
LOC103035479 LOC108416666,LOC108416668 coding downstream 150607 17452017 ~ 17458184 (-)
c22h6orf89 cunh6orf89 coding upstream 1531 17621467 ~ 17627399 (-)
LOC103021559 LOC108415296 coding upstream 45181 17665117 ~ 17672273 (-)
elf3 elf3,ehf,LOC105900760 coding upstream 97963 17717899 ~ 17726253 (-)
LOC103032918 usp49 coding upstream 195273 17815209 ~ 17829572 (-)
med20 med20 coding upstream 210680 17830616 ~ 17837340 (-)
G190804 NA non-coding downstream 13095 17514474 ~ 17595696 (-)
G190809 NA non-coding downstream 54674 17540386 ~ 17554117 (-)
G190812 NA non-coding downstream 56242 17494411 ~ 17552549 (-)
G190810 NA non-coding downstream 95474 17425650 ~ 17513317 (-)
G190869 NA non-coding downstream 128076 17479558 ~ 17480715 (-)
G190811 NA non-coding upstream 31628 17651564 ~ 17653882 (-)
G190887 NA non-coding upstream 44078 17664014 ~ 17701842 (-)
G190889 NA non-coding upstream 71110 17691046 ~ 17716832 (-)
G190891 LOC108412444 non-coding upstream 118578 17738514 ~ 17746733 (-)
G190896 srsf3,srsf3b,LOC107569752,LOC107690536,LOC108413700 non-coding upstream 136007 17755943 ~ 17764797 (-)
G190788 NA other downstream 389011 17217321 ~ 17219780 (-)
irf6 irf6,LOC107599105,LOC106565674 other downstream 415044 17181114 ~ 17193747 (-)
cass4 NA other downstream 739330 16833850 ~ 16869461 (-)
ptpdc1 NA other downstream 1009474 16569623 ~ 16599317 (-)
G190405 fbln2,LOC108424659,LOC107727849,LOC107691338 other downstream 1147863 16345701 ~ 16460928 (-)
mrpl20 mrpl20 other upstream 519427 18139363 ~ 18213530 (-)
LOC111195395 NA other upstream 547304 18167240 ~ 18176164 (-)
LOC103041510 LOC108414096 other upstream 691516 18311452 ~ 18315337 (-)
LOC111195399 wu:fd14a01,myhz1.2,LOC108444093,LOC108443910,LOC108444092,LOC108416711,LOC108416675,LOC108416954,LOC108443907,LOC108254798,LOC108261508,LOC107737926,LOC107575389,LOC108416101,LOC107681327,LOC108261437,LOC108254800,LOC106570860,LOC102780693,LOC101068441,LOC108417180,LOC101164155,LOC105899468,LOC107378336,LOC107378334,LOC101071797,LOC105890352,LOC107372732,LOC107093413,LOC108254796 other upstream 1088383 18708319 ~ 18798915 (-)
LOC103032794 tusc2,tusc2b,LOC107593101,LOC107587002,LOC107695626 other upstream 1277573 18897509 ~ 18902285 (-)

Expression


Co-expression Network