LOC103022234


Basic Information

Item Value
gene id LOC103022234
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 7195 ~ 8289 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XR_002651584.1
TGCCATTTAGCTGTTCATGGTTAAACTGTATTAGTTTAAGTGGTTGTCTGAAAAGCTTCTGTTTAGTAATATTACTAAAGTTGTGCAAATGTCATTTATTTTGGCTTTGCTTTATGCCAGTGCTAATATATGCGTAACCACTAGTATTTATTATTAGGTATGTTGATGGAACCTCTTCTAATTTATAATGGTGTAAAGCTAAACATTTGTTATTCTCTCCATTCCACTCTTTATAGTCCATGTTTGCATAAGTGACAGATCTTAATTGACATAGTTCAGAAACGGGAACCTgcagtttgttgttttttctggtCAAATACACCTGCTGTAGGACTGCCACCCCTAGTACTGTAAGATGGAGCTGTAGAAAGCTGGATTAAATGTAGACAATGTTGGCATCTGTTGTTTCCACAGTTGCTTTATTAAATTGACAGTGTTTATATTGACTGTAATTAAGTTTGTATCCAAAATTTTGACTAATTTCTTTTTGACAGAAAGACTGAATGGCAAAAAGACTGATAAGACGAAAACAACTGAGTCCACAGCAAGATGCTGAGATTCACATCAAAAACAAGACAGACAAACTGGGTCTTGAGGAGAGATTTATTAGCTCTTCTAAAGGACGAGGTGTATTTGCGACTGCCAACTTTTCCAAAGGAGATTTTATCCTGGAATACAGAGGCCAACTCTTAACACAAAATCTCATTCAAAACATTAATTCAggaacagtgtttatttttgattttcaATGGAGAGGGAAGTACTGGAGTGTGGATGCATCTGTTGAAGACAAATCTTTAGGGAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002651584.1 True 806 lncRNA 0.36 3 7195 8289

Neighbor

gene id symbol gene type direction distance location
LOC111195432 NA coding downstream 9340 17629 ~ 20805 (+)
LOC111195433 NA coding downstream 13789 22078 ~ 28758 (+)
LOC103021578 ephb2,ephb2b,LOC108439490,LOC107685632,LOC102781222 coding downstream 25156 33445 ~ 90316 (+)
fam83d NA coding downstream 107223 115512 ~ 120431 (+)
LOC103041710 LOC103041710,LOC108440336 coding downstream 113301 121590 ~ 127184 (+)
G186211 NA non-coding downstream 9261 17550 ~ 23931 (+)
G186214 NA non-coding downstream 16218 24507 ~ 27120 (+)
G186215 NA non-coding downstream 18000 26289 ~ 103864 (+)
G186227 NA non-coding downstream 66441 74730 ~ 98339 (+)
G186230 NA non-coding downstream 69353 77642 ~ 84868 (+)
G186231 NA other downstream 99107 107396 ~ 115087 (+)
cers5 cers5,LOC107698577,LOC107590873,LOC107694004,LOC107718462 other downstream 502286 510575 ~ 538216 (+)
podxl2 NA other downstream 598544 606833 ~ 1095337 (+)
G186880 lmcd1 other downstream 2972208 2980497 ~ 3002015 (+)
G186978 rps23,rs23,LOC106566095,LOC106566598 other downstream 3384098 3392387 ~ 3394843 (+)

Expression


Co-expression Network