G186230


Basic Information

Item Value
gene id G186230
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 77642 ~ 84868 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU252475
ccaagatagcgatgaacgtctgactgttggtgtctgtctaggttgtattcagtcagtggagctcctgtgttttctgttaccaagataaacaagataaaactccagaaatgtacctgaacacacctcatttccagaacaccacgcccatcagtgtagatatattcagaagatctgctgctgtttaaaccagacaggaggatgATAGATAGTGATGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU252475 True 217 lncRNA 0.42 2 77642 84868

Neighbor

gene id symbol gene type direction distance location
LOC111195433 NA coding upstream 48884 22078 ~ 28758 (+)
LOC111195432 NA coding upstream 56837 17629 ~ 20805 (+)
LOC111195347 NA coding upstream 61964 2210 ~ 15678 (+)
fam83d NA coding downstream 30644 115512 ~ 120431 (+)
LOC103041710 LOC103041710,LOC108440336 coding downstream 36722 121590 ~ 127184 (+)
LOC103042533 LOC103042533 coding downstream 57073 141941 ~ 145972 (+)
LOC103043370 LOC103043370,LOC108440332 coding downstream 63448 148316 ~ 152658 (+)
LOC103042837 LOC108440330,LOC108440331 coding downstream 72304 157172 ~ 159544 (+)
G186214 NA non-coding upstream 50522 24507 ~ 27120 (+)
G186211 NA non-coding upstream 53711 17550 ~ 23931 (+)
LOC103022234 NA non-coding upstream 69353 7195 ~ 8289 (+)
LOC103041000 NA non-coding downstream 22213 107081 ~ 109174 (+)
LOC111195451 NA non-coding downstream 28522 113390 ~ 114346 (+)
G186241 NA non-coding downstream 93026 177894 ~ 178778 (+)
G186264 NA non-coding downstream 136248 221116 ~ 254030 (+)
G186279 NA non-coding downstream 208587 293455 ~ 294062 (+)
G186231 NA other downstream 22528 107396 ~ 115087 (+)
cers5 cers5,LOC107698577,LOC107590873,LOC107694004,LOC107718462 other downstream 425707 510575 ~ 538216 (+)
podxl2 NA other downstream 521965 606833 ~ 1095337 (+)
G186880 lmcd1 other downstream 2895629 2980497 ~ 3002015 (+)
G186978 rps23,rs23,LOC106566095,LOC106566598 other downstream 3307519 3392387 ~ 3394843 (+)

Expression


Co-expression Network