G186241


Basic Information

Item Value
gene id G186241
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 177894 ~ 178778 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU252495
gctgcaggagagcggaggagagATATTCAACACAGACTTTTTATCACCTTTTATTGAATACAACCAAGTacatttcacaccggagttaCAGTTACGTTACGTTTGTAAAGAGTAACGTCAGTAGGTTGTGTAGATGCGACCTGTTTACACTTAGTTAAATTTCTCTAGATAAATCAGCAGCAGgtttatattaaagtaaaaagctTCTGTAGAACTACCTCCACCCAGAGTGTTGGTATCAGAGTGAAATTGAATCTGTAAAGAAAGTGCAGGTAACCAACACGTATCTGTGCCTTTACCCTAAATCAGgaatgtttagatgtttataaGGGAAGTAAAGGTTTATAGAAAATGTACAGGTGTGTATAAACGTGTGTAACATTTGCTTTATGAAACGATATGATTTAGAAATGCAGAATGTTTTATCCTGATCTGCACAGATTAAACTCTGTGATGCttcttaaatattatatttttgcttCTTTCTAAAGGTGTAAGGTCACAGCAATAAAGCAGTTTTATAGCAACAGCAGCTCTTAAATGCACGATTTCTACAACAAAACTCATTTATTAAACCACTTAGTGCTCTTATTTAGTTTACTAATGTGATGATAATGCAGAATAATGCACCACAAACAGataaaaacctgttttaaacaaactgaaaaaatCTGTTTATGCAATTAACTTTGTATATTGAAATTCTGCTTTGCTGCTGTTGGTCGAGTAAAAGGgattttttattgtgttcttctgtatagatttttaaaaagtacttattttcacattttaatttataaaaaaatatacaacagaTTTTTGGGGGTATGTTGGTGCTTgcccaaataaacacaacagga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU252495 True 860 lncRNA 0.33 2 177894 178778

Neighbor

gene id symbol gene type direction distance location
LOC103025463 tfe3b,tfe3,LOC108440327,LOC105912251,LOC106582876 coding upstream 3412 167342 ~ 174482 (+)
gnl3l gnl3l coding upstream 11128 160870 ~ 166766 (+)
LOC103042837 LOC108440330,LOC108440331 coding upstream 18350 157172 ~ 159544 (+)
LOC103043370 LOC103043370,LOC108440332 coding upstream 25236 148316 ~ 152658 (+)
LOC103042533 LOC103042533 coding upstream 31922 141941 ~ 145972 (+)
LOC103045901 LOC108440326,LOC108255043,LOC107727863,LOC107685673,LOC107598432 coding downstream 5070 183848 ~ 190357 (+)
LOC103044480 si:dkey-13a21.13,LOC108444173 coding downstream 21590 200368 ~ 218460 (+)
LOC111195348 grm6b,LOC108444164,LOC107564587,LOC107691362,LOC107749460,LOC107597884 coding downstream 43049 221827 ~ 241725 (+)
LOC103046213 mon1bb,LOC108444170,LOC107564673,LOC107727858,LOC107691359,LOC107749456 coding downstream 64494 243272 ~ 248887 (+)
LOC103047032 si:dkey-183j2.10,LOC108444168,LOC107565113,LOC107685669,LOC107727882,LOC107749458,LOC107597793,LOC107691358 coding downstream 90972 269750 ~ 278183 (+)
LOC111195451 NA non-coding upstream 63548 113390 ~ 114346 (+)
LOC103041000 NA non-coding upstream 68720 107081 ~ 109174 (+)
G186215 NA non-coding upstream 74030 26289 ~ 103864 (+)
G186227 NA non-coding upstream 79555 74730 ~ 98339 (+)
G186230 NA non-coding upstream 93026 77642 ~ 84868 (+)
G186264 NA non-coding downstream 42338 221116 ~ 254030 (+)
G186279 NA non-coding downstream 114677 293455 ~ 294062 (+)
G186368 NA non-coding downstream 135182 313960 ~ 340818 (+)
G186375 NA non-coding downstream 244125 422903 ~ 423811 (+)
G186385 NA non-coding downstream 316926 495704 ~ 498408 (+)
G186231 NA other upstream 62807 107396 ~ 115087 (+)
cers5 cers5,LOC107698577,LOC107590873,LOC107694004,LOC107718462 other downstream 331797 510575 ~ 538216 (+)
podxl2 NA other downstream 428055 606833 ~ 1095337 (+)
G186880 lmcd1 other downstream 2801719 2980497 ~ 3002015 (+)
G186978 rps23,rs23,LOC106566095,LOC106566598 other downstream 3213609 3392387 ~ 3394843 (+)
p3h1 NA other downstream 5601113 5779891 ~ 5798979 (+)

Expression


Co-expression Network