LOC111195347


Basic Information

Item Value
gene id LOC111195347
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 2210 ~ 15678 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022682156.1
TCCAGAAGAGCCCTGAGACAGACTGCTCTTCCTGCCCAGTTATAGACGAGGACAGTTCACAGGACAAGCCTTTGGGTGCTGCAGAAAACCAGGAACAAGGAGAACACTCTGTTAGTTGCATCCAGAAGAGCCCTGAGACAGACTGCTCTTCCTGCCCAGTTATAGACGAGGACAGTTCACAGGACAAGCCTTTGGGTGCTGCAGAAAACCAGGAACAAGGAGAACACTCTGTTAGTTGTATCCAGAAGAGCCCTGAGACAGACTGCTCTTCCTGCCCAGTTATAGACGAGGACAGTTCACAGGACAAGCCTTTGGGTGCTGCAGAAAACCAGATGTATGCAGAAACTCCCATGAGTCACATTGTGAGGGATAAGCAGACCGTTTCTTCACGTCAGACAAAAGGAAGGACTAGGTCACTCGAAAGGCCTCTTGGAATTACAGAGCGTAAGGAACAAGGAGAACACTCTGTTAGTTGCATCCAGAAGAGCCCTGAGACAGACTGCTCTTCCTGCCCAGTTATAGACGAGGACAGTTCACAGGACAAGCCTTTGGGTGCTGCAGAAAACCAGGAACAAGGAGAACACTCTGTTAGTTGTATCCAGAAGAGCCCTGAGACAGACTGCTCTTCCTGCCCAGTTATAGACGAGGACAGTTCACAGGACAAGCCTTTGGGTGCTGCAGAAAACCAGGAACAAGGAGAACACTCTGTTAGTTGTATCCAGAAGAGCCCTGAGACAGACTGCTCTTCCTGCCCAGTTATAGACGAGGACAGTTCACAGGACAAGCCTTTGGGTGCTGCAGAAAACCAGATGTATGCAGAAACTCCCATGAGTCACATTGTGAGGGATAAGCAGACCGTTTCTTCACGTCAGACAAAAGGAAGGACTAGGTCACTCGAAAGGCCTCTTGGAATTACAGAGCGTAAGGAACAAGGAGAACACTCTGTTAGTTGCATCCAGAAGAGCCCTGAGACAGACTGCTCTTCCTGCCCAGTTATAGACGAGGACAGTTCACAGGACAAGCCTTTGGGTGCTGCAGAAAACCAGGAACAAGGAGAACACTCTGTTAGTTGTATCCAGAAGAGCCCTGAGACAGACTGCTCTTCCTGCCCAGTTATAGACGAGGACAGTTCACAGGACAAGCCTTTGGGTGCTGCAGAAAACCAGGTATAAACATGGTTTACCAAGATCTACCATAACACGTCTGCCTTCCTACAGGGCTGTCCCCAGTGTGAGATATGTCGAGTGTATGTGTATGCTTGGTGTCCCCAGTTGTAGAGTTGTTGATAAGCATGGATGGATATGAGATGGCCGTGGTCCAGATCGTCCCCGATCTGTTCTAagagtttgtgtatgtgtgtccagTGACCCCAGACTCCCTGTAGAGCTCCAATTGTTGTCTTGTTGCCTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022682156.1 True 1413 mRNA 0.49 10 2210 15678

Neighbor

gene id symbol gene type direction distance location
LOC111195432 NA coding downstream 1951 17629 ~ 20805 (+)
LOC111195433 NA coding downstream 6400 22078 ~ 28758 (+)
LOC103021578 ephb2,ephb2b,LOC108439490,LOC107685632,LOC102781222 coding downstream 17767 33445 ~ 90316 (+)
fam83d NA coding downstream 99834 115512 ~ 120431 (+)
LOC103041710 LOC103041710,LOC108440336 coding downstream 105912 121590 ~ 127184 (+)
G186211 NA non-coding downstream 1872 17550 ~ 23931 (+)
G186214 NA non-coding downstream 8829 24507 ~ 27120 (+)
G186215 NA non-coding downstream 10611 26289 ~ 103864 (+)
G186227 NA non-coding downstream 59052 74730 ~ 98339 (+)
G186230 NA non-coding downstream 61964 77642 ~ 84868 (+)
G186231 NA other downstream 91718 107396 ~ 115087 (+)
cers5 cers5,LOC107698577,LOC107590873,LOC107694004,LOC107718462 other downstream 494897 510575 ~ 538216 (+)
podxl2 NA other downstream 591155 606833 ~ 1095337 (+)
G186880 lmcd1 other downstream 2964819 2980497 ~ 3002015 (+)
G186978 rps23,rs23,LOC106566095,LOC106566598 other downstream 3376709 3392387 ~ 3394843 (+)

Expression


Co-expression Network